Pages that link to "Q70830917"
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The following pages link to Zinc binding in proteins and solution: a simple but accurate nonbonded representation (Q70830917):
Displaying 50 items.
- A computational study of RNA binding and specificity in the tandem zinc finger domain of TIS11d (Q24315797) (← links)
- A new zinc-protein coordination site in intracellular metal trafficking: solution structure of the Apo and Zn(II) forms of ZntA(46-118) (Q27639912) (← links)
- Solution NMR Structure of a Designed Metalloprotein and Complementary Molecular Dynamics Refinement (Q27649856) (← links)
- Structural basis for the autoprocessing of zinc metalloproteases in the thermolysin family (Q27664710) (← links)
- Structural Asymmetry of Phosphodiesterase-9, Potential Protonation of a Glutamic Acid, and Role of the Invariant Glutamine (Q27667496) (← links)
- All-d-Enantiomer of β-Amyloid Peptide Forms Ion Channels in Lipid Bilayers (Q30155354) (← links)
- Metal Ion Modeling Using Classical Mechanics (Q30363020) (← links)
- Prediction of structures of zinc-binding proteins through explicit modeling of metal coordination geometry. (Q30384140) (← links)
- Virtual Screening of Compound Libraries (Q33652555) (← links)
- Determination of the structure form of the fourth ligand of zinc in Acutolysin A using combined quantum mechanical and molecular mechanical simulation (Q33670085) (← links)
- AutoDock4(Zn): an improved AutoDock force field for small-molecule docking to zinc metalloproteins (Q34089389) (← links)
- A transcriptional-switch model for Slr1738-controlled gene expression in the cyanobacterium Synechocystis (Q34144816) (← links)
- RNA Polymerase II with Open and Closed Trigger Loops: Active Site Dynamics and Nucleic Acid Translocation (Q34206064) (← links)
- Force field independent metal parameters using a nonbonded dummy model (Q34267064) (← links)
- Parameterization of highly charged metal ions using the 12-6-4 LJ-type nonbonded model in explicit water (Q35013396) (← links)
- Parametrization of DFTB3/3OB for magnesium and zinc for chemical and biological applications (Q35013411) (← links)
- Molecular dynamics simulations of metalloproteins (Q35053362) (← links)
- Sequential side-chain residue motions transform the binary into the ternary state of DNA polymerase lambda (Q35095792) (← links)
- Five checkpoints maintaining the fidelity of transcription by RNA polymerases in structural and energetic details (Q35098071) (← links)
- DNA pol λ's extraordinary ability to stabilize misaligned DNA. (Q35278258) (← links)
- Comparison of structural, thermodynamic, kinetic and mass transport properties of Mg(2 ) ion models commonly used in biomolecular simulations (Q35537362) (← links)
- Magnesium-cationic dummy atom molecules enhance representation of DNA polymerase beta in molecular dynamics simulations: improved accuracy in studies of structural features and mutational effects (Q35768246) (← links)
- Simulations of Allosteric Motions in the Zinc Sensor CzrA (Q35783590) (← links)
- Modeling Structural Coordination and Ligand Binding in Zinc Proteins with a Polarizable Potential (Q36059874) (← links)
- Elucidating the Role of Residue 67 in IMP-Type Metallo-β-Lactamase Evolution (Q36290672) (← links)
- Retrocyclins kill bacilli and germinating spores of Bacillus anthracis and inactivate anthrax lethal toxin (Q36737682) (← links)
- Insertion of oxidized nucleotide triggers rapid DNA polymerase opening (Q36914612) (← links)
- Residues in the 11 A channel of histone deacetylase 1 promote catalytic activity: implications for designing isoform-selective histone deacetylase inhibitors (Q36995044) (← links)
- Rational Design of Particle Mesh Ewald Compatible Lennard-Jones Parameters for 2 Metal Cations in Explicit Solvent (Q37058615) (← links)
- Energetic and structural details of the trigger-loop closing transition in RNA polymerase II. (Q37078306) (← links)
- Calculation of binding free energies for non-zinc chelating pyrimidine dicarboxamide inhibitors with MMP-13. (Q37106249) (← links)
- Distance-independent charge recombination kinetics in cytochrome c-cytochrome c peroxidase complexes: compensating changes in the electronic coupling and reorganization energies (Q37257161) (← links)
- Relationship between conformational changes in pol lambda's active site upon binding incorrect nucleotides and mismatch incorporation rates (Q37362528) (← links)
- Further Insights in the Binding Mode of Selective Inhibitors to Human PDE4D Enzyme Combining Docking and Molecular Dynamics. (Q37391836) (← links)
- Designed zinc finger protein interacting with the HIV-1 integrase recognition sequence at 2-LTR-circle junctions (Q37457791) (← links)
- Apo and nickel-bound forms of the Pyrococcus horikoshii species of the metalloregulatory protein: NikR characterized by molecular dynamics simulations. (Q37480906) (← links)
- Taking into Account the Ion-induced Dipole Interaction in the Nonbonded Model of Ions (Q37649459) (← links)
- Multiple receptor-ligand based pharmacophore modeling and molecular docking to screen the selective inhibitors of matrix metalloproteinase-9 from natural products (Q38670015) (← links)
- Computational insights into the selectivity mechanism of APP-IP over matrix metalloproteinases (Q39506214) (← links)
- Molecular docking and inhibition of matrix metalloproteinase-2 by novel difluorinatedbenzylidene curcumin analog (Q39686250) (← links)
- Molecular dynamics study of human carbonic anhydrase II in complex with Zn(2 ) and acetazolamide on the basis of all-atom force field simulations (Q39731555) (← links)
- Synthesis, molecular docking and biological evaluation as HDAC inhibitors of cyclopeptide mimetics by a tandem three-component reaction and intramolecular [3 2] cycloaddition. (Q39846240) (← links)
- Effect of mutation on the stabilization energy of HIV-1 zinc fingers: a hybrid local self-consistent field/molecular mechanics investigation. (Q40474115) (← links)
- Molecular Dynamics and Docking Investigations of Several Zoanthamine-Type Marine Alkaloids as Matrix Metaloproteinase-1 Inhibitors (Q41852666) (← links)
- A proton-shuttle reaction mechanism for histone deacetylase 8 and the catalytic role of metal ions (Q41890560) (← links)
- Physical basis of metal-binding specificity in Escherichia coli NikR (Q41893966) (← links)
- New role for leucyl aminopeptidase in glutathione turnover. (Q42102429) (← links)
- Biochemical characterization of IMP-30, a metallo-β-lactamase with enhanced activity toward ceftazidime (Q42110103) (← links)
- A Transferable Non-bonded Pairwise Force Field to Model Zinc Interactions in Metalloproteins (Q42150041) (← links)
- Successful molecular dynamics simulation of the zinc-bound farnesyltransferase using the cationic dummy atom approach. (Q42206822) (← links)