Comparative transcriptomic analysis and structure prediction of novel Newt proteins (Q92660614)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31419228 AND SRC:MED&resulttype=core&format=json

1 May 2020

title

Comparative transcriptomic analysis and structure prediction of novel Newt proteins (English)

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1 May 2020

3

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1 May 2020

Amit Singh

5

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1 May 2020

author name string

Abijeet Singh Mehta

1

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1 May 2020

Agustin Luz-Madrigal

2

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1 May 2020

Panagiotis A Tsonis

4

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1 May 2020

publication date

16 August 2019

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1 May 2020

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1 May 2020

volume

14

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1 May 2020

issue

8

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1 May 2020

page(s)

e0220416

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Creative Commons Attribution 4.0 International

1 May 2020

copyright license

start time

16 August 2019

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

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Brief Local Application of Progesterone via a Wearable Bioreactor Induces Long-Term Regenerative Response in Adult Xenopus Hindlimb

11 February 2021

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Fate mapping during regeneration: cells that undergo compensatory proliferation in damaged Drosophila eye imaginal discs differentiate into multiple retinal accessory cell types

11 February 2021

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11 February 2021

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A soy protein Lunasin can ameliorate amyloid-beta 42 mediated neurodegeneration in Drosophila eye

11 February 2021

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11 February 2021

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11 February 2021

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The body electric 2.0: recent advances in developmental bioelectricity for regenerative and synthetic bioengineering.

11 February 2021

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Role of the immune system in regeneration and its dynamic interplay with adult stem cells

11 February 2021

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Uncovering the regeneration strategies of zebrafish organs: a comprehensive systems biology study on heart, cerebellum, fin, and retina regeneration.

11 February 2021

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Mechanisms of urodele limb regeneration

11 February 2021

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Reading and editing the Pleurodeles waltl genome reveals novel features of tetrapod regeneration.

11 February 2021

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Zebrafish heart regeneration: 15 years of discoveries

11 February 2021

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Imaginal disc regeneration takes flight.

11 February 2021

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Lessons from the swamp: developing small molecules that confer salamander muscle cellularization in mammals.

11 February 2021

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Expression of Hsp70 reveals significant differences between fin regeneration and inflammation in Paramisgurnus dabryanus

11 February 2021

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Promoting tissue regeneration by modulating the immune system.

11 February 2021

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Comparison of Leg Regeneration Potency Between Holometabolous Helicoverpa armigera (Lepidoptera: Noctuidae) and Hemimetabolous Locusta migratoria manilensis (Orthoptera: Acrididae).

11 February 2021

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The interplay between genetic and bioelectrical signaling permits a spatial regionalisation of membrane potentials in model multicellular ensembles

11 February 2021

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Localized epigenetic silencing of a damage-activated WNT enhancer limits regeneration in mature Drosophila imaginal discs.

11 February 2021

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Protein Structure and Function Prediction Using I-TASSER

11 February 2021

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Genetics on the Fly: A Primer on the Drosophila Model System

11 February 2021

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A robust transcriptional program in newts undergoing multiple events of lens regeneration throughout their lifespan

11 February 2021

1 reference

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ResQ: An Approach to Unified Estimation of B-Factor and Residue-Specific Error in Protein Structure Prediction.

11 February 2021

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The Hippo pathway effector Yki downregulates Wg signaling to promote retinal differentiation in the Drosophila eye.

11 February 2021

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Husbandry of Spanish ribbed newts (Pleurodeles waltl).

11 February 2021

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Regeneration, morphogenesis and self-organization

11 February 2021

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Genetic models of apoptosis-induced proliferation decipher activation of JNK and identify a requirement of EGFR signaling for tissue regenerative responses in Drosophila

11 February 2021

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Heat shock protein 70 is required for optimal liver regeneration after partial hepatectomy in mice

11 February 2021

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Novel neuroprotective function of apical-basal polarity gene crumbs in amyloid beta 42 (aβ42) mediated neurodegeneration

11 February 2021

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The zebrafish as a model for complex tissue regeneration

11 February 2021

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Protein kinase A activates the Hippo pathway to modulate cell proliferation and differentiation

11 February 2021

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TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

11 February 2021

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A de novo assembly of the newt transcriptome combined with proteomic validation identifies new protein families expressed during tissue regeneration

11 February 2021

1 reference

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A microarray analysis of gene expression patterns during early phases of newt lens regeneration

11 February 2021

1 reference

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Domain specific genetic mosaic system in the Drosophila eye.

11 February 2021

1 reference

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Upstream regulators of the Hippo pathway

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6697330

ZFIN, the Zebrafish Model Organism Database: increased support for mutants and transgenics

11 February 2021

1 reference

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Hedgehog and Wnt coordinate signaling in myogenic progenitors and regulate limb regeneration

11 February 2021

1 reference

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Drosophila as a genetic model for studying pathogenic human viruses

11 February 2021

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Drosophila as a model for understanding development and disease.

11 February 2021

1 reference

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A glimpse into dorso‐ventral patterning of the Drosophila eye

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6697330

Activation of JNK Signaling Mediates Amyloid-ß-Dependent Cell Death

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6697330

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11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6697330

Regenerative capacity in newts is not altered by repeated regeneration and ageing

11 February 2021

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The Salvador/Warts/Hippo pathway controls regenerative tissue growth in Drosophila melanogaster

11 February 2021

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Differential expression analysis for sequence count data

11 February 2021

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Advances in understanding tissue regenerative capacity and mechanisms in animals

11 February 2021

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Regeneration and transdetermination: The role of wingless and its regulation

11 February 2021

1 reference

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Notch signaling influences neuroprotective and proliferative properties of mature Müller glia

11 February 2021

1 reference

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Regenerative growth in Drosophila imaginal discs is regulated by Wingless and Myc.

11 February 2021

1 reference

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Regulation of organ size: insights from the Drosophila Hippo signaling pathway

11 February 2021

1 reference

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Suppression of the immune response potentiates tadpole tail regeneration during the refractory period.

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6697330

Statistical inferences for isoform expression in RNA-Seq

11 February 2021

1 reference

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GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists

11 February 2021

1 reference

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Triggering the regeneration and tissue repair programs

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6697330

FlyBase : a database for the Drosophila research community

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6697330

Mapping and quantifying mammalian transcriptomes by RNA-Seq

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6697330

SCALLOPED interacts with YORKIE, the nuclear effector of the hippo tumor-suppressor pathway in Drosophila

11 February 2021

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Creating transgenic Drosophila by microinjecting the site-specific phiC31 integrase mRNA and a transgene-containing donor plasmid

11 February 2021

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Elucidation of a universal size-control mechanism in Drosophila and mammals

11 February 2021

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Larval legs of mulberry silkworm Bombyx mori are prototypes for the adult legs

11 February 2021

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Bridging the regeneration gap: genetic insights from diverse animal models

11 February 2021

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Wnt signaling activation during bone regeneration and the role of Dishevelled in chondrocyte proliferation and differentiation.

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6697330

BMP inhibition-driven regulation of six-3 underlies induction of newt lens regeneration

11 February 2021

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Construction of transgenic Drosophila by using the site-specific integrase from phage phiC31

11 February 2021

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A novel role of the hedgehog pathway in lens regeneration.

11 February 2021

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The FlyBase database of the Drosophila genome projects and community literature.

11 February 2021

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Shar-pei mediates cell proliferation arrest during imaginal disc growth in Drosophila

11 February 2021

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6697330

The wings of Bombyx mori develop from larval discs exhibiting an early differentiated state: a preliminary report

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6697330

Reactive oxygen species regulate heat-shock protein 70 via the JAK/STAT pathway

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6697330

The genome sequence of Drosophila melanogaster

11 February 2021

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Stages of embryonic development of the zebrafish

11 February 2021

1 reference

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Analysis of genetic mosaics in developing and adult Drosophila tissues

11 February 2021

1 reference

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Targeted gene expression as a means of altering cell fates and generating dominant phenotypes

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6697330

Production of clones of homozygous diploid zebra fish (Brachydanio rerio)

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6697330

Segregation analyses and gene-centromere distances in zebrafish

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6697330

10.1371/JOURNAL.PONE.0220416

11 February 2021

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31419228 AND SRC:MED&resulttype=core&format=json

1 May 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31419228 AND SRC:MED&resulttype=core&format=json

1 May 2020

PubMed publication ID

31419228

1 reference