ViSEAGO: a Bioconductor package for clustering biological functions using Gene Ontology and semantic similarity (Q92579804)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31406507 AND SRC:MED&resulttype=core&format=json

30 April 2020

title

ViSEAGO: a Bioconductor package for clustering biological functions using Gene Ontology and semantic similarity (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31406507 AND SRC:MED&resulttype=core&format=json

30 April 2020

1 reference

Christelle Hennequet-Antier

series ordinal

3

object named as

Christelle Hennequet-Antier

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31406507 AND SRC:MED&resulttype=core&format=json

30 April 2020

1

Aurélien Brionne

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31406507 AND SRC:MED&resulttype=core&format=json

30 April 2020

author name string

Amélie Juanchich

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31406507 AND SRC:MED&resulttype=core&format=json

30 April 2020

publication date

6 August 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31406507 AND SRC:MED&resulttype=core&format=json

30 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31406507 AND SRC:MED&resulttype=core&format=json

30 April 2020

volume

12

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31406507 AND SRC:MED&resulttype=core&format=json

30 April 2020

page(s)

16

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31406507 AND SRC:MED&resulttype=core&format=json

describes a project that uses

30 April 2020

edgeR

object named as

edgeR

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

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11 February 2021

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Interpretation of biological experiments changes with evolution of the Gene Ontology and its annotations.

11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation

11 February 2021

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REVIGO summarizes and visualizes long lists of gene ontology terms

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6685253

GOSemSim: an R package for measuring semantic similarity among GO terms and gene products

11 February 2021

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Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

11 February 2021

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11 February 2021

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Metrics for GO based protein semantic similarity: a systematic evaluation

11 February 2021

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11 February 2021

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A new method to measure the semantic similarity of GO terms

11 February 2021

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Enrichment or depletion of a GO category within a class of genes: which test?

11 February 2021

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A new measure for functional similarity of gene products based on Gene Ontology

11 February 2021

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Improved scoring of functional groups from gene expression data by decorrelating GO graph structure

11 February 2021

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6685253

Gene ontology: tool for the unification of biology

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6685253

10.1186/S13040-019-0204-1

11 February 2021

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31406507 AND SRC:MED&resulttype=core&format=json

journals/biodatamining/BrionneJH19

30 April 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31406507 AND SRC:MED&resulttype=core&format=json

30 April 2020

PubMed publication ID

31406507

1 reference