Endodermal Maternal Transcription Factors Establish Super-Enhancers during Zygotic Genome Activation (Q92542205)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31167141 AND SRC:MED&resulttype=core&format=json

30 April 2020

title

Endodermal Maternal Transcription Factors Establish Super-Enhancers during Zygotic Genome Activation (English)

1 reference

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30 April 2020

author name string

Kitt D Paraiso

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31167141 AND SRC:MED&resulttype=core&format=json

30 April 2020

Ira L Blitz

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31167141 AND SRC:MED&resulttype=core&format=json

30 April 2020

Masani Coley

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31167141 AND SRC:MED&resulttype=core&format=json

30 April 2020

Jessica Cheung

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31167141 AND SRC:MED&resulttype=core&format=json

30 April 2020

Norihiro Sudou

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31167141 AND SRC:MED&resulttype=core&format=json

30 April 2020

Masanori Taira

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31167141 AND SRC:MED&resulttype=core&format=json

30 April 2020

Ken W Y Cho

7

1 reference

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30 April 2020

publication date

1 June 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31167141 AND SRC:MED&resulttype=core&format=json

30 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31167141 AND SRC:MED&resulttype=core&format=json

30 April 2020

volume

27

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31167141 AND SRC:MED&resulttype=core&format=json

30 April 2020

issue

10

1 reference

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30 April 2020

page(s)

2962-2977.e5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31167141 AND SRC:MED&resulttype=core&format=json

Chromatin analysis in human early development reveals epigenetic transition during ZGA.

30 April 2020

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Foxh1 Occupies cis-Regulatory Modules Prior to Dynamic Transcription Factor Interactions Controlling the Mesendoderm Gene Program.

11 February 2021

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High-throughput analysis reveals novel maternal germline RNAs crucial for primordial germ cell preservation and proper migration

11 February 2021

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11 February 2021

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A New Chicken Genome Assembly Provides Insight into Avian Genome Structure

11 February 2021

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11 February 2021

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A catalog of Xenopus tropicalis transcription factors and their regional expression in the early gastrula stage embryo

11 February 2021

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FoxH1 mediates a Grg4 and Smad2 dependent transcriptional switch in Nodal signaling during Xenopus mesoderm development

11 February 2021

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Tissue- and stage-specific Wnt target gene expression is controlled subsequent to β-catenin recruitment to cis-regulatory modules

11 February 2021

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Transcriptome analysis of different developmental stages of amphioxus reveals dynamic changes of distinct classes of genes during development

11 February 2021

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11 February 2021

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Measuring Absolute RNA Copy Numbers at High Temporal Resolution Reveals Transcriptome Kinetics in Development

11 February 2021

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Embryonic transcription is controlled by maternally defined chromatin state.

11 February 2021

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Zelda is differentially required for chromatin accessibility, transcription factor binding, and gene expression in the early Drosophila embryo.

11 February 2021

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Molecular asymmetry in the 8-cell stage Xenopus tropicalis embryo described by single blastomere transcript sequencing

11 February 2021

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Caenorhabditis elegans TBX-2 Directly Regulates Its Own Expression in a Negative Autoregulatory Loop

11 February 2021

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Histone titration against the genome sets the DNA-to-cytoplasm threshold for the Xenopus midblastula transition.

11 February 2021

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Genome-wide view of TGFβ/Foxh1 regulation of the early mesendoderm program.

11 February 2021

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Establishment of regions of genomic activity during the Drosophila maternal to zygotic transition

11 February 2021

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Developmental enhancers are marked independently of zygotic Nodal signals in Xenopus

11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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Master transcription factors and mediator establish super-enhancers at key cell identity genes

11 February 2021

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11 February 2021

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11 February 2021

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The Tbx20 homolog Midline represses wingless in conjunction with Groucho during the maintenance of segment polarity

11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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Zebrafish endoderm formation is regulated by combinatorial Nodal, FGF and BMP signalling.

11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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11 February 2021

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Unequal distribution of otx1 mRnas among cleavage stage blastomeres in the teleost, Leucopsarion petersii (shiro-uo).

11 February 2021

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Techniques and probes for the study of Xenopus tropicalis development

11 February 2021

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Determinants of T box protein specificity.

11 February 2021

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Early embryonic expression of a LIM-homeobox gene Cs-lhx3 is downstream of beta-catenin and responsible for the endoderm differentiation in Ciona savignyi embryos

11 February 2021

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Maternal VegT is the initiator of a molecular network specifying endoderm in Xenopus laevis.

11 February 2021

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11 February 2021

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Developmental expression of the hemichordate otx ortholog

11 February 2021

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Xotx1 maternal transcripts are vegetally localized in Xenopus laevis oocytes

11 February 2021

1 reference

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11 February 2021

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Transcription repression by Xenopus ET and its human ortholog TBX3, a gene involved in ulnar-mammary syndrome

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6610736

Vegetal cell fate specification and anterior neuroectoderm formation by Hroth, the ascidian homologue of orthodenticle/otx

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6610736

The role of maternal VegT in establishing the primary germ layers in Xenopus embryos

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6610736

Differential expression of sea urchin Otx isoform (hpOtxE and HpOtxL) mRNAs during early development.

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6610736

Genomic Cis-Regulatory Logic: Experimental and Computational Analysis of a Sea Urchin Gene

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6610736

A vegetally localized T-box transcription factor in Xenopus eggs specifies mesoderm and endoderm and is essential for embryonic mesoderm formation

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6610736

Hroth an orthodenticle-related homeobox gene of the ascidian, Halocynthia roretzi: its expression and putative roles in the axis formation during embryogenesis

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6610736

The Xenopus T-box gene, Antipodean, encodes a vegetally localised maternal mRNA and can trigger mesoderm formation.

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6610736

Xenopus VegT RNA is localized to the vegetal cortex during oogenesis and encodes a novel T-box transcription factor involved in mesodermal patterning

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6610736

Expression cloning of a Xenopus T-related gene (Xombi) involved in mesodermal patterning and blastopore lip formation

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6610736

Competition between chromatin and transcription complex assembly regulates gene expression during early development

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6610736

Different spatio-temporal expressions of three otx homeoprotein transcripts during zebrafish embryogenesis

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6610736

Anterior neurectoderm is progressively induced during gastrulation: the role of the Xenopus homeobox gene orthodenticle

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6610736

Constraints on transcriptional activator function contribute to transcriptional quiescence during early Xenopus embryogenesis

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6610736

Autoregulatory and gap gene response elements of the even-skipped promoter of Drosophila

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6610736

Early and late periodic patterns of even skipped expression are controlled by distinct regulatory elements that respond to different spatial cues.

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6610736

Determination of spatial domains of zygotic gene expression in the Drosophila embryo by the affinity of binding sites for the bicoid morphogen.

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6610736

Single-Step Method of RNA Isolation by Acid Guanidinium Thiocyanate–Phenol–Chloroform Extraction

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6610736

Appendix G: In Situ Hybridization: An Improved Whole-Mount Method for Xenopus Embryos

11 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6610736

10.1016/J.CELREP.2019.05.013

11 February 2021

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31167141 AND SRC:MED&resulttype=core&format=json

30 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31167141 AND SRC:MED&resulttype=core&format=json

30 April 2020

PubMed publication ID

31167141

1 reference