Investigating the role of super-enhancer RNAs underlying embryonic stem cell differentiation (Q92330185)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31888456 AND SRC:MED&resulttype=core&format=json

28 April 2020

title

Investigating the role of super-enhancer RNAs underlying embryonic stem cell differentiation (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31888456 AND SRC:MED&resulttype=core&format=json

stem cell differentiation

28 April 2020

main subject

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4

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31888456 AND SRC:MED&resulttype=core&format=json

28 April 2020

author name string

Hao-Chun Chang

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31888456 AND SRC:MED&resulttype=core&format=json

28 April 2020

Hsuan-Cheng Huang

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31888456 AND SRC:MED&resulttype=core&format=json

28 April 2020

Hsueh-Fen Juan

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31888456 AND SRC:MED&resulttype=core&format=json

28 April 2020

language of work or name

English

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publication date

30 December 2019

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28 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31888456 AND SRC:MED&resulttype=core&format=json

28 April 2020

volume

20

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31888456 AND SRC:MED&resulttype=core&format=json

28 April 2020

issue

Suppl 10

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28 April 2020

page(s)

896

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31888456 AND SRC:MED&resulttype=core&format=json

describes a project that uses

28 April 2020

scikit-learn

object named as

scikit-learn

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CZ Software Mentions: A large dataset of software mentions in the biomedical literature

scikit-learn

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cites work

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Enhancer and super-enhancer: Positive regulators in gene transcription

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Enhancer RNAs (eRNAs): New Insights into Gene Transcription and Disease Treatment

23 February 2021

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Targeting Super-Enhancers for Disease Treatment and Diagnosis.

23 February 2021

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HBL1 Is a Human Long Noncoding RNA that Modulates Cardiomyocyte Development from Pluripotent Stem Cells by Counteracting MIR1

23 February 2021

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Functional Enhancers As Master Regulators of Tissue-Specific Gene Regulation and Cancer Development

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Epstein-Barr virus super-enhancer eRNAs are essential for MYC oncogene expression and lymphoblast proliferation

23 February 2021

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23 February 2021

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Super-Enhancers at the Nanog Locus Differentially Regulate Neighboring Pluripotency-Associated Genes

23 February 2021

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Development of myotendinous-like junctions that anchor cardiac valves requires fibromodulin and lumican

23 February 2021

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23 February 2021

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Genome-wide analysis of enhancer RNA in gene regulation across 12 mouse tissues

23 February 2021

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RNA exosome-regulated long non-coding RNA transcription controls super-enhancer activity.

23 February 2021

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Gateways to the FANTOM5 promoter level mammalian expression atlas

23 February 2021

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Chromatin architecture reorganization during stem cell differentiation.

23 February 2021

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Divergent signalling pathways regulate lipopolysaccharide-induced eRNA expression in human monocytic THP1 cells

23 February 2021

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What are super-enhancers?

23 February 2021

1 reference

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CRISPR reveals a distal super-enhancer required for Sox2 expression in mouse embryonic stem cells

23 February 2021

1 reference

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Mirin: identifying microRNA regulatory modules in protein–protein interaction networks

23 February 2021

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Enhancer RNAs and regulated transcriptional programs

23 February 2021

1 reference

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An atlas of active enhancers across human cell types and tissues

23 February 2021

1 reference

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Super-enhancers in the control of cell identity and disease

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6936076

Profiling of transcriptional and epigenetic changes during directed endothelial differentiation of human embryonic stem cells identifies FOXA2 as a marker of early mesoderm commitment

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6936076

Master transcription factors and mediator establish super-enhancers at key cell identity genes

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6936076

FOSL1 controls the assembly of endothelial cells into capillary tubes by direct repression of αv and β3 integrin transcription

23 February 2021

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6936076

The long-range interaction landscape of gene promoters

23 February 2021

1 reference

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Comparing enhancer action in cis and in trans.

23 February 2021

1 reference

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Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium

23 February 2021

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23 February 2021

1 reference

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Transcription factor TEAD4 regulates expression of myogenin and the unfolded protein response genes during C2C12 cell differentiation

23 February 2021

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23 February 2021

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Mediator and cohesin connect gene expression and chromatin architecture

23 February 2021

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Widespread transcription at neuronal activity-regulated enhancers

23 February 2021

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23 February 2021

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Maternal depletion of CTCF reveals multiple functions during oocyte and preimplantation embryo development

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6936076

Projected gradient methods for nonnegative matrix factorization

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6936076

Nanog and transcriptional networks in embryonic stem cell pluripotency

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6936076

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6936076

Lack of JunD promotes pressure overload-induced apoptosis, hypertrophic growth, and angiogenesis in the heart

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6936076

A role for AP-1 in apoptosis: the case for and against

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6936076

Distribution of the calcium-binding protein SPARC in tissues of embryonic and adult mice.

23 February 2021

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=6936076

10.1186/S12864-019-6293-X

23 February 2021

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31888456 AND SRC:MED&resulttype=core&format=json

28 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:31888456 AND SRC:MED&resulttype=core&format=json

28 April 2020

PubMed publication ID

31888456

1 reference