Single-cell RNA-sequencing analysis identifies host long noncoding RNA MAMDC2-AS1 as a co-factor for HSV-1 nuclear transport (Q90744999)

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16 April 2020

title

Single-cell RNA-sequencing analysis identifies host long noncoding RNA MAMDC2-AS1 as a co-factor for HSV-1 nuclear transport (English)

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16 April 2020

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Herpes simplex virus type 1

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Yiliang Wang

1

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16 April 2020

Lianzhou Huang

2

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16 April 2020

Yun Wang

3

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16 April 2020

Weisheng Luo

4

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16 April 2020

Feng Li

5

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16 April 2020

Ji Xiao

6

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16 April 2020

Shurong Qin

7

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16 April 2020

Zhaoyang Wang

8

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16 April 2020

Xiaowei Song

9

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16 April 2020

Yuan Wang

10

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16 April 2020

Fujun Jin

11

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16 April 2020

Yifei Wang

12

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16 April 2020

publication date

5 March 2020

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International Journal of Biological Sciences

16 April 2020

published in

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16 April 2020

volume

16

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issue

9

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16 April 2020

page(s)

1586-1603

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Transactivation of the major capsid protein gene of herpes simplex virus type 1 requires a cellular transcription factor

16 April 2020

cites work

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12 December 2020

YY1 is the cellular factor shown previously to bind to regulatory regions of several leaky-late (beta gamma, gamma 1) genes of herpes simplex virus type 1.

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12 December 2020

Identification of the sites of interaction between the scaffold and outer shell in herpes simplex virus-1 capsids by difference electron imaging

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12 December 2020

Crystal structure of the conserved core of the herpes simplex virus transcriptional regulatory protein VP16

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12 December 2020

Strategies in the design of antiviral drugs

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12 December 2020

The herpes simplex virus VP16-induced complex: the makings of a regulatory switch

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12 December 2020

Geldanamycin, a ligand of heat shock protein 90, inhibits the replication of herpes simplex virus type 1 in vitro

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12 December 2020

Herpes simplex virus type 1 DNA polymerase requires the mammalian chaperone hsp90 for proper localization to the nucleus

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12 December 2020

Eclipse phase of herpes simplex virus type 1 infection: Efficient dynein-mediated capsid transport without the small capsid protein VP26.

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12 December 2020

CPC: assess the protein-coding potential of transcripts using sequence features and support vector machine.

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12 December 2020

Expression of a noncoding RNA is elevated in Alzheimer's disease and drives rapid feed-forward regulation of beta-secretase

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12 December 2020

Autophagy is an essential component of Drosophila immunity against vesicular stomatitis virus

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12 December 2020

Herpesvirus capsid association with the nuclear pore complex and viral DNA release involve the nucleoporin CAN/Nup214 and the capsid protein pUL25.

1 reference

12 December 2020

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

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12 December 2020

Pentagalloylglucose downregulates cofilin1 and inhibits HSV-1 infection

1 reference

12 December 2020

Interaction of c-Cbl with Myosin IIA Regulates Bleb Associated Macropinocytosis of Kaposi's Sarcoma-Associated Herpesvirus

1 reference

12 December 2020

Roles of the nuclear lamina in stable nuclear association and assembly of a herpesviral transactivator complex on viral immediate-early genes

1 reference

12 December 2020

Fast gapped-read alignment with Bowtie 2

1 reference

12 December 2020

Cofilin 1-mediated biphasic F-actin dynamics of neuronal cells affect herpes simplex virus 1 infection and replication

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12 December 2020

Anti-herpes simplex virus efficacies of 2-aminobenzamide derivatives as novel HSP90 inhibitors.

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12 December 2020

NEAT1 long noncoding RNA and paraspeckle bodies modulate HIV-1 posttranscriptional expression

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12 December 2020

Utilizing sequence intrinsic composition to classify protein-coding and long non-coding transcripts

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12 December 2020

Long noncoding RNA NEAT1-dependent SFPQ relocation from promoter region to paraspeckle mediates IL8 expression upon immune stimuli.

1 reference

12 December 2020

Heat-shock protein 90 promotes nuclear transport of herpes simplex virus 1 capsid protein by interacting with acetylated tubulin

1 reference

12 December 2020

Herpes simplex virus internalization into epithelial cells requires Na /H exchangers and p21-activated kinases but neither clathrin- nor caveolin-mediated endocytosis

1 reference

12 December 2020

NRAV, a long noncoding RNA, modulates antiviral responses through suppression of interferon-stimulated gene transcription

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12 December 2020

Widespread disruption of host transcription termination in HSV-1 infection.

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12 December 2020

Long non-coding RNAs in innate and adaptive immunity

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12 December 2020

Long noncoding RNA: Novel links between gene expression and innate immunity

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12 December 2020

Long noncoding RNAs in viral infections

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12 December 2020

lncRNA-mediated regulation of the interferon response

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12 December 2020

Long non-coding antisense RNA KRT7-AS is activated in gastric cancers and supports cancer cell progression by increasing KRT7 expression

1 reference

12 December 2020

Novel Role for Protein Inhibitor of Activated STAT 4 (PIAS4) in the Restriction of Herpes Simplex Virus 1 by the Cellular Intrinsic Antiviral Immune Response

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12 December 2020

Robust transcriptome-wide discovery of RNA-binding protein binding sites with enhanced CLIP (eCLIP).

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12 December 2020

New strategies against drug resistance to herpes simplex virus

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12 December 2020

Long noncoding RNA EGOT negatively affects the antiviral response and favors HCV replication.

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12 December 2020

Functional prediction of differentially expressed lncRNAs in HSV-1 infected human foreskin fibroblasts.

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12 December 2020

Transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and Ballgown

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12 December 2020

NEAT1 modulates herpes simplex virus-1 replication by regulating viral gene transcription

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12 December 2020

The Impact of the Interferon/TNF-Related Apoptosis-Inducing Ligand Signaling Axis on Disease Progression in Respiratory Viral Infection and Beyond

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12 December 2020

Bre Enhances Osteoblastic Differentiation by Promoting the Mdm2-Mediated Degradation of p53.

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12 December 2020

Roles of LncRNAs in Viral Infections

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12 December 2020

Bronchial Epithelial Cells from Cystic Fibrosis Patients Express a Specific Long Non-coding RNA Signature upon Pseudomonas aeruginosa Infection.

1 reference

12 December 2020

Long-Read Isoform Sequencing Reveals a Hidden Complexity of the Transcriptional Landscape of Herpes Simplex Virus Type 1.

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12 December 2020

HSP90: a promising broad-spectrum antiviral drug target.

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12 December 2020

An interferon-independent lncRNA promotes viral replication by modulating cellular metabolism

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12 December 2020

Widespread activation of antisense transcription of the host genome during herpes simplex virus 1 infection.

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12 December 2020

Heat-shock protein 90α is involved in maintaining the stability of VP16 and VP16-mediated transactivation of α genes from herpes simplex virus-1

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12 December 2020

HSV-1 single-cell analysis reveals the activation of anti-viral and developmental programs in distinct sub-populations.

1 reference

12 December 2020

Influenza Virus Exploits an Interferon-Independent lncRNA to Preserve Viral RNA Synthesis through Stabilizing Viral RNA Polymerase PB1

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12 December 2020

Single-cell RNA-sequencing of herpes simplex virus 1-infected cells connects NRF2 activation to an antiviral program

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12 December 2020

Identifiers

DOI

10.7150/IJBS.42556

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32226304 AND SRC:MED&resulttype=core&format=json

16 April 2020

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:32226304 AND SRC:MED&resulttype=core&format=json

16 April 2020

PubMed publication ID

32226304

1 reference