Evolutionary insights into Trm112-methyltransferase holoenzymes involved in translation between archaea and eukaryotes (Q90238891)

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12 April 2020

title

Evolutionary insights into Trm112-methyltransferase holoenzymes involved in translation between archaea and eukaryotes (English)

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3

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Marc Graille

10

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author name string

Nhan van Tran

1

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Leslie Muller

2

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Roxane Lestini

4

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Juliette Létoquart

5

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Nathalie Ulryck

6

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Patrick A Limbach

7

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Valérie de Crécy-Lagard

8

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Sarah Cianférani

9

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publication date

1 September 2018

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12 April 2020

published in

Nucleic Acids Research

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volume

46

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issue

16

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page(s)

8483-8499

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Creative Commons Attribution-NonCommercial 4.0 International

12 April 2020

copyright license

start time

13 July 2018

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April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

Extent of N-terminal methionine excision from Escherichia coli proteins is governed by the side-chain length of the penultimate amino acid

1 reference

12 December 2020

Halobacterium volcanii tRNAs. Identification of 41 tRNAs covering all amino acids, and the sequences of 33 class I tRNAs.

1 reference

12 December 2020

Genomic evidence for two functionally distinct gene classes.

1 reference

12 December 2020

A direct estimation of the context effect on the efficiency of termination

1 reference

12 December 2020

The crystal structure of human eukaryotic release factor eRF1--mechanism of stop codon recognition and peptidyl-tRNA hydrolysis

1 reference

12 December 2020

A post-translational modification in the GGQ motif of RF2 from Escherichia coli stimulates termination of translation

1 reference

12 December 2020

The hemK gene in Escherichia coli encodes the N(5)-glutamine methyltransferase that modifies peptide release factors

1 reference

12 December 2020

rRNA modifications and ribosome function

1 reference

12 December 2020

Substructure solution with SHELXD

1 reference

12 December 2020

Development of a gene knockout system for the halophilic archaeon Haloferax volcanii by use of the pyrE gene

1 reference

12 December 2020

Many paths to methyltransfer: a chronicle of convergence

1 reference

12 December 2020

Novel methyltransferase for modified uridine residues at the wobble position of tRNA.

1 reference

12 December 2020

SOLVE and RESOLVE: automated structure solution, density modification and model building

1 reference

12 December 2020

N2-methylation of guanosine at position 10 in tRNA is catalyzed by a THUMP domain-containing, S-adenosylmethionine-dependent methyltransferase, conserved in Archaea and Eukaryota

1 reference

12 December 2020

The glutamine residue of the conserved GGQ motif in Saccharomyces cerevisiae release factor eRF1 is methylated by the product of the YDR140w gene.

1 reference

12 December 2020

Trm11p and Trm112p are both required for the formation of 2-methylguanosine at position 10 in yeast tRNA

1 reference

12 December 2020

The yeast translation release factors Mrf1p and Sup45p (eRF1) are methylated, respectively, by the methyltransferases Mtq1p and Mtq2p

1 reference

12 December 2020

Molecular basis for bacterial class I release factor methylation by PrmC.

1 reference

12 December 2020

tRNAGlu wobble uridine methylation by Trm9 identifies Elongator's key role for zymocin-induced cell death in yeast

1 reference

12 December 2020

The zinc finger protein Ynr046w is plurifunctional and a component of the eRF1 methyltransferase in yeast

1 reference

12 December 2020

Analyzing chromatin remodeling complexes using shotgun proteomics and normalized spectral abundance factors

1 reference

12 December 2020

Methylation of bacterial release factors RF1 and RF2 is required for normal translation termination in vivo.

1 reference

12 December 2020

Trm9-catalyzed tRNA modifications link translation to the DNA damage response

1 reference

12 December 2020

Iterative model building, structure refinement and density modification with the PHENIX AutoBuild wizard

1 reference

12 December 2020

Bud23 methylates G1575 of 18S rRNA and is required for efficient nuclear export of pre-40S subunits

1 reference

12 December 2020

The deep archaeal roots of eukaryotes

1 reference

12 December 2020

HemK2 protein, encoded on human chromosome 21, methylates translation termination factor eRF1

1 reference

12 December 2020

RNomics and Modomics in the halophilic archaea Haloferax volcanii: identification of RNA modification genes

1 reference

12 December 2020

A novel human AlkB homologue, ALKBH8, contributes to human bladder cancer progression.

1 reference

12 December 2020

Phasercrystallographic software

1 reference

12 December 2020

Mammalian ALKBH8 possesses tRNA methyltransferase activity required for the biogenesis of multiple wobble uridine modifications implicated in translational decoding

1 reference

12 December 2020

PHENIX: a comprehensive Python-based system for macromolecular structure solution

1 reference

12 December 2020

Human AlkB homolog ABH8 Is a tRNA methyltransferase required for wobble uridine modification and DNA damage survival

1 reference

12 December 2020

Features and development of Coot

1 reference

12 December 2020

Trm112p is a 15-kDa zinc finger protein essential for the activity of two tRNA and one protein methyltransferases in yeast

1 reference

12 December 2020

ConSurf 2010: calculating evolutionary conservation in sequence and structure of proteins and nucleic acids

1 reference

12 December 2020

Two novel methyltransferases acting upon eukaryotic elongation factor 1A in Saccharomyces cerevisiae

1 reference

12 December 2020

The archaeal Xpf/Mus81/FANCM homolog Hef and the Holliday junction resolvase Hjc define alternative pathways that are essential for cell viability in Haloferax volcanii

1 reference

12 December 2020

The Archaeal Lsm Protein Binds to Small RNAs

1 reference

12 December 2020

Crystal structures of NodS N-methyltransferase from Bradyrhizobium japonicum in ligand-free form and as SAH complex

1 reference

12 December 2020

The Novel Metastasis Promoter Merm1/Wbscr22 Enhances Tumor Cell Survival in the Vasculature by Suppressing Zac1/p53-Dependent Apoptosis

1 reference

12 December 2020

Molecular recognition and catalysis in translation termination complexes

1 reference

12 December 2020

Biosynthesis and function of tRNA modifications in Archaea

1 reference

12 December 2020

Mechanism of activation of methyltransferases involved in translation by the Trm112 'hub' protein

1 reference

12 December 2020

Unexpected Accumulation of ncm5U and ncm5s2U in a trm9 Mutant Suggests an Additional Step in the Synthesis of mcm5U and mcm5s2U

1 reference

12 December 2020

A protein complex network of Drosophila melanogaster

1 reference

12 December 2020

The box C/D and H/ACA snoRNPs: key players in the modification, processing and the dynamic folding of ribosomal RNA

1 reference

12 December 2020

Identification of Molecular Vulnerabilities in Human Multiple Myeloma Cells by RNA Interference Lethality Screening of the Druggable Genome

1 reference

12 December 2020

Methylation of class I translation termination factors: structural and functional aspects.

1 reference

12 December 2020

The Elongator subcomplex Elp456 is a hexameric RecA-like ATPase

1 reference

12 December 2020

Trm112 is required for Bud23-mediated methylation of the 18S rRNA at position G1575.

1 reference

12 December 2020

Methylation of translation-associated proteins in Saccharomyces cerevisiae: Identification of methylated lysines and their methyltransferases.

1 reference

12 December 2020

Structural basis for translation termination by archaeal RF1 and GTP-bound EF1 complex

1 reference

12 December 2020

Translational infidelity-induced protein stress results from a deficiency in Trm9-catalyzed tRNA modifications

1 reference

12 December 2020

The rRNA methyltransferase Bud23 shows functional interaction with components of the SSU processome and RNase MRP.

1 reference

12 December 2020

Distinct tRNA modifications in the thermo-acidophilic archaeon, Thermoplasma acidophilum

1 reference

12 December 2020

The human WBSCR22 protein is involved in the biogenesis of the 40S ribosomal subunits in mammalian cells

1 reference

12 December 2020

N6-methyladenosine-dependent regulation of messenger RNA stability

1 reference

12 December 2020

The methyltransferase WBSCR22/Merm1 enhances glucocorticoid receptor function and is regulated in lung inflammation and cancer

1 reference

12 December 2020

A new system for naming ribosomal proteins

1 reference

12 December 2020

Gene expression regulation mediated through reversible m⁶A RNA methylation

1 reference

12 December 2020

Deciphering key features in protein structures with the new ENDscript server

1 reference

12 December 2020

Genome-wide study of hypomethylated and induced genes in patients with liver cancer unravels novel anticancer targets

1 reference

12 December 2020

Membrane-bound methyltransferase complex VapA-VipC-VapB guides epigenetic control of fungal development.

1 reference

12 December 2020

Identification and characterization of a novel evolutionarily conserved lysine-specific methyltransferase targeting eukaryotic translation elongation factor 2 (eEF2)

1 reference

12 December 2020

Translational roles of elongation factor 2 protein lysine methylation

1 reference

12 December 2020

A new type of protein lysine methyltransferase trimethylates Lys-79 of elongation factor 1A

1 reference

12 December 2020

Structural and functional studies of Bud23-Trm112 reveal 18S rRNA N7-G1575 methylation occurs on late 40S precursor ribosomes

1 reference

12 December 2020

One Juliet and four Romeos: VeA and its methyltransferases.

1 reference

12 December 2020

The human 18S rRNA base methyltransferases DIMT1L and WBSCR22-TRMT112 but not rRNA modification are required for ribosome biogenesis

1 reference

12 December 2020

N(6)-methyladenosine Modulates Messenger RNA Translation Efficiency

1 reference

12 December 2020

Saccharomyces cerevisiae Eukaryotic Elongation Factor 1A (eEF1A) Is Methylated at Lys-390 by a METTL21-Like Methyltransferase

1 reference

12 December 2020

The BioPlex Network: A Systematic Exploration of the Human Interactome

1 reference

12 December 2020

The Stability of Ribosome Biogenesis Factor WBSCR22 Is Regulated by Interaction with TRMT112 via Ubiquitin-Proteasome Pathway

1 reference

12 December 2020

Structural basis for stop codon recognition in eukaryotes

1 reference

12 December 2020

'View From A Bridge': A New Perspective on Eukaryotic rRNA Base Modification.

1 reference

12 December 2020

Insights into molecular plasticity in protein complexes from Trm9-Trm112 tRNA modifying enzyme crystal structure

1 reference

12 December 2020

Novel N-terminal and Lysine Methyltransferases That Target Translation Elongation Factor 1A in Yeast and Human.

1 reference

12 December 2020

Trm9-Catalyzed tRNA Modifications Regulate Global Protein Expression by Codon-Biased Translation

1 reference

12 December 2020

Bacterial Interactomes: Interacting Protein Partners Share Similar Function and Are Validated in Independent Assays More Frequently Than Previously Reported

1 reference

12 December 2020

From Prebiotics to Probiotics: The Evolution and Functions of tRNA Modifications

1 reference

12 December 2020

Evolution of the archaeal and mammalian information processing systems: towards an archaeal model for human disease

1 reference

12 December 2020

Messenger RNA modifications: Form, distribution, and function

1 reference

12 December 2020

Structural and functional analyses of the archaeal tRNA m2G/m22G10 methyltransferase aTrm11 provide mechanistic insights into site specificity of a tRNA methyltransferase that contains common RNA-binding modules

1 reference

12 December 2020

Structural basis for tRNA modification by Elp3 from Dehalococcoides mccartyi

1 reference

12 December 2020

Activation mode of the eukaryotic m2G10 tRNA methyltransferase Trm11 by its partner protein Trm112

1 reference

12 December 2020

Trm112, a Protein Activator of Methyltransferases Modifying Actors of the Eukaryotic Translational Apparatus

1 reference

12 December 2020

Visualization of chemical modifications in the human 80S ribosome structure

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKY638

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30010922 AND SRC:MED&resulttype=core&format=json

12 April 2020

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12 April 2020

PubMed publication ID

30010922

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