Locking the nontemplate DNA to control transcription (Q88664012)

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26 March 2020

title

Locking the nontemplate DNA to control transcription (English)

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26 March 2020

3

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26 March 2020

Irina Artsimovitch

series ordinal

4

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26 March 2020

author name string

Yuri Nedialkov

series ordinal

1

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26 March 2020

Dmitri Svetlov

series ordinal

2

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26 March 2020

publication date

1 August 2018

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26 March 2020

published in

Molecular Microbiology

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volume

109

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issue

4

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page(s)

445-457

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describes a project that uses

26 March 2020

ImageQuant

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11 June 2022

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inferred from PubMed Central ID database lookup

cites work

The phage lambda gene Q transcription antiterminator binds DNA in the late gene promoter as it modifies RNA polymerase

1 reference

12 December 2020

Structure of transcription elongation complexes in vivo

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12 December 2020

KOW: a novel motif linking a bacterial transcription factor with ribosomal proteins

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12 December 2020

Crystal structure of Thermus aquaticus core RNA polymerase at 3.3 A resolution.

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12 December 2020

Pausing by bacterial RNA polymerase is mediated by mechanistically distinct classes of signals

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12 December 2020

Structural basis of transcription: an RNA polymerase II elongation complex at 3.3 A resolution

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12 December 2020

Restructuring of an RNA polymerase holoenzyme elongation complex by lambdoid phage Q proteins

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12 December 2020

The transcriptional regulator RfaH stimulates RNA chain synthesis after recruitment to elongation complexes by the exposed nontemplate DNA strand.

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12 December 2020

Region 1.2 of the RNA polymerase sigma subunit controls recognition of the -10 promoter element

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12 December 2020

Structural Basis for Converting a General Transcription Factor into an Operon-Specific Virulence Regulator

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12 December 2020

Structural basis for transcription elongation by bacterial RNA polymerase

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12 December 2020

Allosteric control of the RNA polymerase by the elongation factor RfaH

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12 December 2020

The carboxy-terminal coiled-coil of the RNA polymerase β′-subunit is the main binding site for Gre factors

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12 December 2020

The elongation factor RfaH and the initiation factor sigma bind to the same site on the transcription elongation complex

1 reference

12 December 2020

Functional specialization of transcription elongation factors

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12 December 2020

Mechanism of sequence-specific pausing of bacterial RNA polymerase

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12 December 2020

Functional regions of the N-terminal domain of the antiterminator RfaH.

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12 December 2020

Spt4/5 stimulates transcription elongation through the RNA polymerase clamp coiled-coil motif

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12 December 2020

Functional analysis of Thermus thermophilus transcription factor NusG

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12 December 2020

Activation-induced cytidine deaminase targets DNA at sites of RNA polymerase II stalling by interaction with Spt5

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12 December 2020

RNA polymerase and transcription elongation factor Spt4/5 complex structure

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12 December 2020

σ70-dependent Transcription Pausing in Escherichia coli

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12 December 2020

Architecture of the RNA polymerase-Spt4/5 complex and basis of universal transcription processivity

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12 December 2020

The β Subunit Gate Loop Is Required for RNA Polymerase Modification by RfaH and NusG

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12 December 2020

Structural Basis for Promoter −10 Element Recognition by the Bacterial RNA Polymerase σ Subunit

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12 December 2020

Structural transitions in the transcription elongation complexes of bacterial RNA polymerase during σ-dependent pausing.

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12 December 2020

Opening and closing of the bacterial RNA polymerase clamp

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12 December 2020

Structural basis of transcriptional pausing in bacteria

1 reference

12 December 2020

NusG-Spt5 proteins-Universal tools for transcription modification and communication

1 reference

12 December 2020

Translocation and fidelity of Escherichia coli RNA polymerase

1 reference

12 December 2020

Insights into the mechanism of initial transcription in Escherichia coli RNA polymerase

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12 December 2020

UvrD facilitates DNA repair by pulling RNA polymerase backwards

1 reference

12 December 2020

Regulation of promoter-proximal transcription elongation: enhanced DNA scrunching drives λQ antiterminator-dependent escape from a σ70-dependent pause.

1 reference

12 December 2020

CBR antimicrobials alter coupling between the bridge helix and the β subunit in RNA polymerase.

1 reference

12 December 2020

Mycobacterial RNA polymerase requires a U-tract at intrinsic terminators and is aided by NusG at suboptimal terminators

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12 December 2020

A pause sequence enriched at translation start sites drives transcription dynamics in vivo

1 reference

12 December 2020

Interactions between RNA polymerase and the "core recognition element" counteract pausing

1 reference

12 December 2020

RNA polymerase pausing and nascent-RNA structure formation are linked through clamp-domain movement

1 reference

12 December 2020

Purification of bacterial RNA polymerase: tools and protocols

1 reference

12 December 2020

Mechanism of Transcription Termination by RNA Polymerase III Utilizes a Non-template Strand Sequence-Specific Signal Element

1 reference

12 December 2020

Structural and biochemical insights into the DNA-binding mode of MjSpt4p:Spt5 complex at the exit tunnel of RNAPII

1 reference

12 December 2020

The quantitative and condition-dependent Escherichia coli proteome

1 reference

12 December 2020

NusG Is a Sequence-specific RNA Polymerase Pause Factor That Binds to the Non-template DNA within the Paused Transcription Bubble

1 reference

12 December 2020

A Two-Way Street: Regulatory Interplay between RNA Polymerase and Nascent RNA Structure

1 reference

12 December 2020

Biochemical Analysis of Yeast Suppressor of Ty 4/5 (Spt4/5) Reveals the Importance of Nucleic Acid Interactions in the Prevention of RNA Polymerase II Arrest

1 reference

12 December 2020

NusG inhibits RNA polymerase backtracking by stabilizing the minimal transcription bubble

1 reference

12 December 2020

RNA polymerase gate loop guides the nontemplate DNA strand in transcription complexes.

1 reference

12 December 2020

Open complex DNA scrunching: A key to transcription start site selection and promoter escape

1 reference

12 December 2020

Structural basis of transcription arrest by coliphage HK022 Nun in an Escherichia coli RNA polymerase elongation complex.

1 reference

12 December 2020

RNA polymerase motions during promoter melting.

1 reference

12 December 2020

Flipping states: a few key residues decide the winning conformation of the only universally conserved transcription factor

1 reference

12 December 2020

Structure of the complete elongation complex of RNA polymerase II with basal factors.

1 reference

12 December 2020

Structure of a transcribing RNA polymerase II-DSIF complex reveals a multidentate DNA-RNA clamp

1 reference

12 December 2020

A novel mode for transcription inhibition mediated by PNA-induced R-loops with a model in vitro system.

1 reference

12 December 2020

RNA Polymerase Accommodates a Pause RNA Hairpin by Global Conformational Rearrangements that Prolong Pausing.

1 reference

12 December 2020

Structural Basis for NusA Stabilized Transcriptional Pausing.

1 reference

12 December 2020

The universally-conserved transcription factor RfaH is recruited to a hairpin structure of the non-template DNA strand.

1 reference

12 December 2020

Structural Basis for Transcript Elongation Control by NusG Family Universal Regulators

1 reference

12 December 2020

Identifiers

DOI

10.1111/MMI.13983

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26 March 2020

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26 March 2020

PubMed publication ID

29758107

1 reference