Fiber-optic implant for simultaneous fluorescence-based calcium recordings and BOLD fMRI in mice (Q88220506)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29599439 AND SRC:MED&resulttype=core&format=json

21 March 2020

title

Fiber-optic implant for simultaneous fluorescence-based calcium recordings and BOLD fMRI in mice (English)

1 reference

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blood-oxygen-level dependent imaging

21 March 2020

main subject

1 reference

Felix Schlegel

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29599439 AND SRC:MED&resulttype=core&format=json

21 March 2020

Yaroslav Sych

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29599439 AND SRC:MED&resulttype=core&format=json

21 March 2020

Aileen Schroeter

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29599439 AND SRC:MED&resulttype=core&format=json

21 March 2020

Bruno Weber

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29599439 AND SRC:MED&resulttype=core&format=json

21 March 2020

Markus Rudin

7

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21 March 2020

publication date

29 March 2018

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21 March 2020

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29599439 AND SRC:MED&resulttype=core&format=json

21 March 2020

volume

13

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21 March 2020

issue

5

1 reference

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21 March 2020

page(s)

840-855

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29599439 AND SRC:MED&resulttype=core&format=json

Dynamic magnetic resonance imaging of human brain activity during primary sensory stimulation

21 March 2020

cites work

1 reference

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Illuminating the BOLD signal: combined fMRI-fNIRS studies

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Coupling mechanism and significance of the BOLD signal: a status report

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Monitoring the patient's EEG during echo planar MRI

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31 March 2020

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Neurophysiological investigation of the basis of the fMRI signal

31 March 2020

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Neurophysiology of the BOLD fMRI signal in awake monkeys

31 March 2020

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Putting a finishing touch on GECIs.

31 March 2020

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Imaging Neuronal Activity with Genetically Encoded Calcium Indicators

31 March 2020

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31 March 2020

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In vivo calcium recordings and channelrhodopsin-2 activation through an optical fiber

31 March 2020

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Multi-channel fiber photometry for population neuronal activity recording

31 March 2020

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Fiberoptic system for recording dendritic calcium signals in layer 5 neocortical pyramidal cells in freely moving rats

31 March 2020

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Making waves: initiation and propagation of corticothalamic Ca2 waves in vivo

31 March 2020

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Concurrent activation of striatal direct and indirect pathways during action initiation.

31 March 2020

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Locomotion, Theta Oscillations, and the Speed-Correlated Firing of Hippocampal Neurons Are Controlled by a Medial Septal Glutamatergic Circuit

31 March 2020

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Deep brain optical measurements of cell type-specific neural activity in behaving mice

31 March 2020

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Awake dynamics and brain-wide direct inputs of hypothalamic MCH and orexin networks

31 March 2020

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Simultaneous BOLD fMRI and fiber-optic calcium recording in rat neocortex

31 March 2020

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Global and local fMRI signals driven by neurons defined optogenetically by type and wiring

31 March 2020

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Hippocampal CA3 activation alleviates fMRI-BOLD responses in the rat prefrontal cortex induced by electrical VTA stimulation

31 March 2020

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Unexpected global impact of VTA dopamine neuron activation as measured by opto-fMRI.

31 March 2020

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Characterization of the functional MRI response temporal linearity via optical control of neocortical pyramidal neurons

31 March 2020

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Volumetric Spatial Correlations of Neurovascular Coupling Studied using Single Pulse Opto-fMRI.

31 March 2020

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Assessing sensory versus optogenetic network activation by combining (o)fMRI with optical Ca2 recordings

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Light controls cerebral blood flow in naive animals

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Imaging calcium microdomains within entire astrocyte territories and endfeet with GCaMPs expressed using adeno-associated viruses.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

A high signal-to-noise Ca(2 ) probe composed of a single green fluorescent protein

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Ultrasensitive fluorescent proteins for imaging neuronal activity

31 March 2020

1 reference

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Fluorescent indicators for Ca2 based on green fluorescent proteins and calmodulin

31 March 2020

1 reference

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Expanded dynamic range of fluorescent indicators for Ca(2 ) by circularly permuted yellow fluorescent proteins.

31 March 2020

1 reference

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Spontaneous network activity visualized by ultrasensitive Ca(2 ) indicators, yellow Cameleon-Nano

31 March 2020

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Sensitive red protein calcium indicators for imaging neural activity

31 March 2020

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Ca(2 ) signaling in astrocytes from Ip3r2(-/-) mice in brain slices and during startle responses in vivo.

31 March 2020

1 reference

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Reorganization of cortical population activity imaged throughout long-term sensory deprivation

31 March 2020

1 reference

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Long-term In Vivo Calcium Imaging of Astrocytes Reveals Distinct Cellular Compartment Responses to Sensory Stimulation.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Implantable fiber-optic interface for parallel multisite long-term optical dynamic brain interrogation in freely moving mice

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Genetically encoded calcium indicators for studying long-term calcium dynamics during apoptosis

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Simultaneous FMRI and electrophysiology in the rodent brain.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Simultaneous recording of neuronal signals and functional NMR imaging

31 March 2020

1 reference

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Simultaneous fast measurement of circuit dynamics at multiple sites across the mammalian brain

31 March 2020

1 reference

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Dynamic Measurement of Tumor Vascular Permeability and Perfusion using a Hybrid System for Simultaneous Magnetic Resonance and Fluorescence Imaging

31 March 2020

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In vivo dendritic calcium imaging with a fiberoptic periscope system

31 March 2020

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Current progress in genetically encoded voltage indicators for neural activity recording

31 March 2020

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Real-time determination of intracellular oxygen in bacteria using a genetically encoded FRET-based biosensor

31 March 2020

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Imaging intracellular pH in live cells with a genetically encoded red fluorescent protein sensor.

31 March 2020

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A genetically encoded ratiometric indicator for chloride: capturing chloride transients in cultured hippocampal neurons

31 March 2020

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Construction and optimization of a family of genetically encoded metabolite sensors by semirational protein engineering.

31 March 2020

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A genetically encoded FRET lactate sensor and its use to detect the Warburg effect in single cancer cells

31 March 2020

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In Vivo Evidence for a Lactate Gradient from Astrocytes to Neurons.

31 March 2020

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A genetically encoded fluorescent reporter reveals oscillatory phosphorylation by protein kinase C

31 March 2020

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DREADDs for Neuroscientists

31 March 2020

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Channelrhodopsin-2 and optical control of excitable cells

31 March 2020

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Mouse transgenic approaches in optogenetics

31 March 2020

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Thy1-GCaMP6 transgenic mice for neuronal population imaging in vivo

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Mapping brain networks in awake mice using combined optical neural control and fMRI

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Time to wake up: Studying neurovascular coupling and brain-wide circuit function in the un-anesthetized animal

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Optimization of a GCaMP Calcium Indicator for Neural Activity Imaging

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Transgenic mice for intersectional targeting of neural sensors and effectors with high specificity and performance

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

New Transgenic Mouse Lines for Selectively Targeting Astrocytes and Studying Calcium Signals in Astrocyte Processes In Situ and In Vivo.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Anatomical characterization of Cre driver mice for neural circuit mapping and manipulation

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Long-term, high-resolution imaging in the mouse neocortex through a chronic cranial window

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Micro MRI of the mouse brain using a novel 400 MHz cryogenic quadrature RF probe

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Anaesthesia of small rodents during magnetic resonance imaging

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Effect of alpha-chloralose, halothane, pentobarbital and nitrous oxide anesthesia on metabolic coupling in somatosensory cortex of rat

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Anesthetic and analgesic considerations in the experimental animal

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Mapping the mouse brain with rs-fMRI: An optimized pipeline for functional network identification.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Optimization of anesthesia protocol for resting-state fMRI in mice based on differential effects of anesthetics on functional connectivity patterns.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Intact-Brain Analyses Reveal Distinct Information Carried by SNc Dopamine Subcircuits

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

BOLD study of stimulation-induced neural activity and resting-state connectivity in medetomidine-sedated rat

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Assessment of brain responses to innocuous and noxious electrical forepaw stimulation in mice using BOLD fMRI

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

High field BOLD response to forepaw stimulation in the mouse

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Specificity of stimulus-evoked fMRI responses in the mouse: the influence of systemic physiological changes associated with innocuous stimulation under four different anesthetics

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

The hemodynamic response to somatosensory stimulation in mice depends on the anesthetic used: Implications on analysis of mouse fMRI data

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Direct imaging of macrovascular and microvascular contributions to BOLD fMRI in layers IV–V of the rat whisker–barrel cortex

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Light stimulus frequency dependence of activity in the rat visual system as studied with high-resolution BOLD fMRI.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

In vivo two-photon imaging of sensory-evoked dendritic calcium signals in cortical neurons

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Statistical Analysis of fMRI Time-Series: A Critical Review of the GLM Approach

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Line scanning fMRI reveals earlier onset of optogenetically evoked BOLD response in rat somatosensory cortex as compared to sensory stimulation

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Deciphering laminar-specific neural inputs with line-scanning fMRI.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Adenoviral-mediated, high-level, cell-specific transgene expression: a SYN1-WPRE cassette mediates increased transgene expression with no loss of neuron specificity

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Neuron-specific expression of therapeutic proteins: evaluation of different cellular promoters in recombinant adenoviral vectors

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

GFAP promoter elements required for region-specific and astrocyte-specific expression

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Intracranial Injection of Adeno-associated Viral Vectors

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Stereotaxic gene delivery in the rodent brain

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Physiological noise effects on the flip angle selection in BOLD fMRI.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Optogenetics in neural systems

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

An optical neural interface: in vivo control of rodent motor cortex with integrated fiberoptic and optogenetic technology

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Construction of implantable optical fibers for long-term optogenetic manipulation of neural circuits

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

A novel slow (< 1 Hz) oscillation of neocortical neurons in vivo: depolarizing and hyperpolarizing components

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Sleep-dependent improvement in visuomotor learning: a causal role for slow waves

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Resting-state hemodynamics are spatiotemporally coupled to synchronized and symmetric neural activity in excitatory neurons

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Transient neuronal coactivations embedded in globally propagating waves underlie resting-state functional connectivity

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

MRI compatible optrodes for simultaneous LFP and optogenetic fMRI investigation of seizure-like afterdischarges

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Simultaneous fMRI and local field potential measurements during epileptic seizures in medetomidine-sedated rats using raser pulse sequence.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Ultra high-resolution fMRI and electrophysiology of the rat primary somatosensory cortex

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Single-unit stability using chronically implanted multielectrode arrays

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Long Term Recordings with Immobile Silicon Probes in the Mouse Cortex

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Feasibility and safety of longitudinal magnetic resonance imaging in a rodent model with intracortical microwire implants

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Steady or changing? Long-term monitoring of neuronal population activity

31 March 2020

1 reference

https://api.crossref.org/works/10.1038/NPROT.2018.003

Optical recording of neuronal activity with a genetically-encoded calcium indicator in anesthetized and freely moving mice

31 March 2020

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/29599439

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NPROT.2018.003

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29599439 AND SRC:MED&resulttype=core&format=json

21 March 2020

1 reference