Chemical topology: complex molecular knots, links, and entanglements (Q84407436)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21692460 AND SRC:MED&resulttype=core&format=json

5 February 2020

title

Chemical topology: complex molecular knots, links, and entanglements (English)

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5 February 2020

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1

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5 February 2020

3

J Fraser Stoddart

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5 February 2020

2

Jean-Pierre Sauvage

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5 February 2020

publication date

21 June 2011

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5 February 2020

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21692460 AND SRC:MED&resulttype=core&format=json

5 February 2020

volume

111

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21692460 AND SRC:MED&resulttype=core&format=json

5 February 2020

issue

9

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5 February 2020

page(s)

5434-5464

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The construction of a trefoil knot from a DNA branched junction motif

5 February 2020

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The crystal structure of plant acetohydroxy acid isomeroreductase complexed with NADPH, two magnesium ions and a herbicidal transition state analog determined at 1.65Aresolution

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Cap for copper(I) ions! Metallosupramolecular solid and solution state structures on the basis of the dynamic tetrahedral [Cu(phenAr2)(py)2] motif

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On the relative motion of the Earth and the luminiferous ether

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Rational construction of 2D and 3D borromean arrayed organic crystals by hydrogen-bond-directed self-assembly

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Trinuclear Copper(I)-bipyridine Triskelion: Template/Bascule Control of Coordination Complex Stereochemistry in a Trefoil Knot Precursor This work was supported by the US National Science Foundation (CHE-9904275)

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Molecular borromean rings

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Synthesis of catenanes and molecular knots by copper(I)-directed formation of the precursors followed by ruthenium(II)-catalysed ring-closing metathesis

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Nanoscale borromeates

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Topological transformations of synthetic DNA knots.

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Directed self-assembly of a ring-in-ring complex

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Ring-in-ring structures from phenanthroline macrocycles with exo- and endotopic binding sites

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Copper(I)- or Iron(II)-Templated Synthesis of Molecular Knots Containing Two Tetrahedral or Octahedral Coordination Sites

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A new doubly interlocked [2]catenane

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From supramolecular chemistry towards constitutional dynamic chemistry and adaptive chemistry

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Self-Assembly of a Metallomacrocycle Templated by Iron(II)

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Protein knots and fold complexity: some new twists.

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A [2] Catenane Made to Order

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11 October 2022

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Macrocycles within Macrocycles: Cyclen, Cyclam, and Their Transition Metal Complexes Encapsulated in Cucurbit

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11 October 2022

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Chiroptical properties of an optically pure dicopper(I) trefoil knot and its enantioselectivity in luminescence quenching reactions

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11 October 2022

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Synthesis, structure, and dynamics of six-membered metallacoronands and metallodendrimers of iron and indium

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11 October 2022

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Novel Amide-Based Molecular Knots: Complete Enantiomeric Separation, Chiroptical Properties, and Absolute Configuration We would like to thank Prof. F. V. Schurig for his advice regarding the separation of the enantiomers. The results reported here

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Highly stable tetrathiafulvalene radical dimers in [3]catenanes

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Noncomplementarity in base sequences between the cohesive ends of coliphages 186 and ? and the formation of interlocked rings between the two DNA's

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11 October 2022

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The dynamic chemistry of molecular borromean rings and Solomon knots.

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11 October 2022

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Metallomacrocycles with a difference: macrocyclic complexes with exocyclic ruthenium(II)-containing domains

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11 October 2022

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A ring-in-ring complex

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11 October 2022

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Chemistry. Chemical topology and interlocking molecules

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11 October 2022

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Topologically chiral covalent assemblies of molecular knots with linear, branched, and cyclic architectures

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Knotted Heterodinuclear Complexes

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Catenated Circular DNA Molecules in HeLa Cell Mitochondria

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11 October 2022

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The chemistry of the mechanical bond

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Metric engineering of supramolecular Borromean rings

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Cellular roles of dna topoisomerases: a molecular perspective

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Are there knots in proteins?

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Molecular structure of a catenand and its copper(I) catenate: complete rearrangement of the interlocked macrocyclic ligands by complexation

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

pKNOT: the protein KNOT web server

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Yarn‐Like Carbon Nanotube Fibers

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Self-assembly of discrete cyclic nanostructures mediated by transition metals

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11 October 2022

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Topology in chemistry: designing Möbius molecules

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11 October 2022

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Perspectives in Supramolecular Chemistry—From Molecular Recognition towards Molecular Information Processing and Self-Organization

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Synthetic approaches to a molecular Borromean link: two-ring threading with polypyridine templates

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11 October 2022

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Iron(II)-templated synthesis of [3]rotaxanes by passing two threads through the same ring

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11 October 2022

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Construction of a DNA-Truncated Octahedron

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11 October 2022

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Template-Directed Olefin Cross Metathesis

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11 October 2022

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Cryptates: the chemistry of macropolycyclic inclusion complexes

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11 October 2022

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Three-Component Entanglements Consisting of Three Crescent-Shaped Bidentate Ligands Coordinated to an Octahedral Metal Centre

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11 October 2022

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Synthesis of a doubly interlocked [2]-catenane.

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11 October 2022

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Design and construction of an organic crystal with a novel interpenetrated n-Borromean linked topology

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11 October 2022

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Circular Dimer and Catenate Forms of Mitochondrial DNA in Human Leukaemic Leucocytes

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11 October 2022

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Template-directed synthesis of mechanically interlocked molecular bundles using dynamic covalent chemistry.

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Molecular Meccano, 27. A Template-directed Synthesis of a Molecular Trefoil Knot

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Protein folding: To knot or not to knot?

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

On Types of Knotted Curves

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

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11 October 2022

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Dendronized molecular knots: selective synthesis of various generations, enantiomer separation, circular dichroism

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11 October 2022

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Topoisomerase II as a target for anticancer drugs: when enzymes stop being nice

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11 October 2022

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Borromean sheets assembled by self-supporting argentophilic interactions

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11 October 2022

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Knotted single-stranded DNA rings: a novel topological isomer of circular single-stranded DNA formed by treatment with Escherichia coli omega protein

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Mechanism of enhanced rectification in unimolecular Borromean ring devices

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Template-directed synthesis employing reversible imine bond formation

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11 October 2022

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Active metal template synthesis of [2]catenanes

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Magic Ring Catenation by Olefin Metathesis

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11 October 2022

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Folding and cutting DNA into reconfigurable topological nanostructures

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11 October 2022

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Chemical synthesis gets a fillip from molecular recognition and self-assembly processes

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Knotaxanes--rotaxanes with knots as stoppers

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11 October 2022

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Cyclic polyethers and their complexes with metal salts

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Synthesizing interlocked molecules dynamically

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Facile Synthesis and Solid-State Structure of a Benzylic Amide[2]Catenane

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Amide-based molecular knots as platforms for fluorescent switches

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11 October 2022

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A Stevedore's protein knot

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11 October 2022

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Onion-type complexation based on carbon nanorings and a buckminsterfullerene

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11 October 2022

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Generation of a 4-crossing [2]-catenane motif by the 2D→2D parallel interpenetration of pairs of (4,4) sheets

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11 October 2022

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Synthesis of multi-1,10-phenanthroline ligands with 1,3-phenylene linkers and their lithium complexes

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11 October 2022

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Metallosupramolecular self-assembly of a universal 3-ravel.

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11 October 2022

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Assembly of Borromean rings from DNA

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11 October 2022

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Electrophoretic mobility of DNA knots

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11 October 2022

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Stereoselective synthesis of a topologically chiral molecule: the trefoil knot

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Nucleic Acid Nanostructures and Topology

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Stellated polyhedral assembly of a topologically complicated Pd4L4 ‘Solomon cube’

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Complexes of Macrocycles with gamma-Cyclodextrin As Deduced from NMR Diffusion Measurements

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Dynamic nanoscale Borromean links.

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

A polyhedron made of tRNAs

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11 October 2022

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Total synthesis of the first molecular Moebius strip

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Triply interlocked covalent organic cages.

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Construction, substitution, and sorting of metallo-organic structures via subcomponent self-assembly

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Supramolecular templating in thermodynamically controlled synthesis

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Cyclic [5]paraphenyleneacetylene: synthesis, properties, and formation of a ring-in-ring complex showing a considerably large association constant and entropy effect.

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The Design of Molecular Hosts, Guests, and Their Complexes (Nobel Lecture)

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A novel synthetic strategy for hexanuclear supramolecular architecturesElectronic supplementary information (ESI) available: synthesis and single crystal X-ray diffraction. See http://www.rsc.org/suppdata/cc/b3/b300605k/

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Supramolecular Chemistry

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Exceptional self-penetrating networks containing unprecedented quintuple-stranded molecular braid, 9-fold meso helices, and 17-fold interwoven helices

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11 October 2022

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New molecular topologies by fourfold metathesis reactions within a hydrogen-bonded calix[4]arene dimer

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11 October 2022

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Nanoscale Borromean links for real

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11 October 2022

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A polynomial invariant for knots via von Neumann algebras

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

A self-threaded "molecular 8"

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https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Hexafunctionalized borromeates using olefin cross metathesis

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11 October 2022

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11 October 2022

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Anion-templated assembly of a [2]catenane.

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Homo- and heterometallic [2x2] grid arrays containing RuII, OsII, and FeII subunits and their mononuclear RuII and OsII precursors: synthesis, absorption spectra, redox behavior, and luminescence properties

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Mechanical Bond Formation by Radical Templation

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Synthesis of a molecular trefoil knot by folding and closing on an octahedral coordination template.

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Residual topological isomerism of intertwined molecules

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

The Synthesis and Ion Bindings of Synthetic Multidentate Macrocyclic Compounds

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

A topologically chiral molecular dumbbell

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Self-assembly of a 3-D triply interlocked chiral [2]catenane.

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

A quadruply stranded metallohelicate and its spontaneous dimerization into an interlocked metallohelicate

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Expanding roles for templates in synthesis

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Fe(II), Ru(II) and Re(I) complexes of endotopic, sterically non-hindering, U-shaped 8,8'-disubstituted-3,3'-biisoquinoline ligands: syntheses and spectroscopic properties

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

The development of L2X2Ru=CHR olefin metathesis catalysts: an organometallic success story

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Nanoscale borromean rings

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Self-assembly of 2D Borromean networks through hydrogen-bonding recognition.

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

DNA as supramolecular scaffold for functional molecules: progress in DNA nanotechnology.

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Programmed Materials Synthesis with DNA

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

A dye-buoyant-density method for the detection and isolation of closed circular duplex DNA: the closed circular DNA in HeLa cells

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Benzylic Imine Catenates: Readily Accessible Octahedral Analogues of the Sauvage Catenates

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Molecular Topology: Easy Self-Assembly of an Organometallic Doubly Braided [2]Catenane

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

An enzyme with a deep trefoil knot for the active-site architecture

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Knotting and threading of molecules: chemistry and chirality of molecular knots and their assemblies

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

The CdSO4, rutile, cooperite and quartz dual nets: interpenetration and catenation

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

A Molecular Knot with Twelve Amide Groups-One-Step Synthesis, Crystal Structure, Chirality Extracts were presented during a talk at the Universität Düsseldorf on January 11, 2000. We thank Dr. Christian Seel and Dr. Rudolf Hartmann for suggestions a

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11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Covalent chemistry and conformational dynamics of topologically chiral amide-based molecular knots

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

DNA in a material world

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

A light-sensing knot revealed by the structure of the chromophore-binding domain of phytochrome

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Dynamic Combinatorial Chemistry

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Spontaneous knotting-from oligoamide threads to trefoil knots

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Topological stereochemistry

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

DNA topoisomerases: essential enzymes and lethal targets

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Biochemical topology: applications to DNA recombination and replication

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Tumor cell death induced by topoisomerase-targeting drugs.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Dicopper(I) trefoil knots and related unknotted molecular systems: influence of ring size and structural factors on their synthesis and electrochemical and excited-state properties

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Structure and folding of a designed knotted protein

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Intricate knots in proteins: Function and evolution

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Sulfate anion templated synthesis of a triply interlocked capsule.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Interlocked and Intertwined Structures and Superstructures

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

The crystal structure of DehI reveals a new alpha-haloacid dehalogenase fold and active-site mechanism

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

A molecular solomon link

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Sulfate anion-templated assembly of a [2]catenane

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Absolute Configuration and Chemical Topology

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

DNA topoisomerases: structure, function, and mechanism

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Formation of two (6,3) networks showing structural diversity, Borromean topology and conformational chirality in the same crystal.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Templated Synthesis of Interlocked Molecules

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Tight single-stranded DNA knots

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Topology in molecules inspired, seen and represented

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Influence of a knot on the strength of a polymer strand

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Quantitative self-assembly of a [2]catenane from two preformed molecular rings

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

A "compartmental" Borromean weave coordination polymer exhibiting saturated hydrogen bonding to anions and water cluster inclusion

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

A [2]catenane and a [2]rotaxane as prototypes of topological and Euclidean molecular "rubber gloves".

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Statistical mechanics and topology of polymer chains

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Passing two strings through the same ring using an octahedral metal center as template: a new synthesis of [3]rotaxanes

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Supramolecular topology

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Tying a molecular knot with optical tweezers

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Crystal structure of S-adenosylmethionine synthetase

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Imaging of catenated, figure-of-eight, and trefoil knot polymer rings

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Long Chain-Substituted and Triply Functionalized Molecular Knots – Synthesis, Topological Chirality and Monolayer Formation

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

A Synthetic Molecular Trefoil Knot

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Multiple catenanes derived from calix[4]arenes

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

A trefoil knot made of amino acids and steroids

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Synergistic self-assembly of RNA and DNA molecules

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Rational design of DNA nanoarchitectures

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Automatic Molecular Weaving Prototyped by Using Single‐Stranded DNA

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Dynamic covalent chemistry

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Rapid knot detection and application to protein structure prediction.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Molecular Composite Knots

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

The Protein Data Bank

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Self-assembly of rings, catenanes, and a doubly braided catenane containing gold(I): the hinge-group effect in diacetylide ligands

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Dicopper (I) trefoil knots: Demetallation kinetic studies and molecular structures

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Cyclophanes within cyclophanes: the synthesis of a pyromellitic diimide-based macrocycle as a structural unit in a molecular tube and its inclusion phenomena

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Knot tied around an octahedral metal centre

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1021/CR200034U

Identifiers

DOI

10.1021/CR200034U

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21692460 AND SRC:MED&resulttype=core&format=json

5 February 2020

1 reference