Native and non-native interactions along protein folding and unfolding pathways (Q77926241)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11948791 AND SRC:MED&resulttype=core&format=json

9 December 2019

title

Native and non-native interactions along protein folding and unfolding pathways (English)

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9 December 2019

2

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9 December 2019

3

Martin Karplus

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9 December 2019

author name string

Emanuele Paci

series ordinal

1

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9 December 2019

publication date

1 May 2002

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9 December 2019

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9 December 2019

volume

47

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9 December 2019

issue

3

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9 December 2019

page(s)

379-392

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Understanding protein folding via free-energy surfaces from theory and experiment

9 December 2019

cites work

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Pathways to a protein folding intermediate observed in a 1-microsecond simulation in aqueous solution

21 January 2018

1 reference

Reversible peptide folding in solution by molecular dynamics simulation

21 January 2018

1 reference

Solution conformations and thermodynamics of structured peptides: molecular dynamics simulation with an implicit solvation model.

21 January 2018

1 reference

Molecular dynamics simulations of beta-hairpin folding

21 January 2018

1 reference

Folding simulations of a three-stranded antiparallel beta -sheet peptide

21 January 2018

1 reference

COMPUTING: Screen Savers of the World Unite!

21 January 2018

1 reference

Theoretical studies of protein folding and unfolding

21 January 2018

1 reference

The nucleation-collapse mechanism in protein folding: evidence for the non-uniqueness of the folding nucleus

21 January 2018

1 reference

Exploring the origins of topological frustration: design of a minimally frustrated model of fragment B of protein A.

21 January 2018

1 reference

Protein Folding: A Perspective from Theory and Experiment.

21 January 2018

1 reference

On “Levinthal paradox” and the theory of protein folding

21 January 2018

1 reference

Entropic barriers, transition states, funnels, and exponential protein folding kinetics: a simple model

21 January 2018

1 reference

Rate of protein folding near the point of thermodynamic equilibrium between the coil and the most stable chain fold

21 January 2018

1 reference

The Levinthal paradox: yesterday and today

21 January 2018

1 reference

Theoretical Studies of Protein Folding

21 January 2018

1 reference

Go-ing for the prediction of protein folding mechanisms

21 January 2018

1 reference

Discrete molecular dynamics studies of the folding of a protein-like model

21 January 2018

1 reference

Topological and energetic factors: what determines the structural details of the transition state ensemble and "en-route" intermediates for protein folding? An investigation for small globular proteins

21 January 2018

1 reference

Three key residues form a critical contact network in a protein folding transition state

21 January 2018

1 reference

A simple model for calculating the kinetics of protein folding from three-dimensional structures

21 January 2018

1 reference

Matching theory and experiment in protein folding

21 January 2018

1 reference

The folding thermodynamics and kinetics of crambin using an all-atom Monte Carlo simulation

21 January 2018

1 reference

Contact order, transition state placement and the refolding rates of single domain proteins.

21 January 2018

1 reference

Topology, stability, sequence, and length: defining the determinants of two-state protein folding kinetics

21 January 2018

1 reference

Simulation of activation free energies in molecular systems

21 January 2018

1 reference

Effective energy function for proteins in solution

21 January 2018

1 reference

"New View" of Protein Folding Reconciled with the Old Through Multiple Unfolding Simulations

21 January 2018

1 reference

Identification and characterization of the unfolding transition state of chymotrypsin inhibitor 2 by molecular dynamics simulations

21 January 2018

1 reference

Discrimination of the native from misfolded protein models with an energy function including implicit solvation

21 January 2018

1 reference

Forced unfolding of fibronectin type 3 modules: an analysis by biased molecular dynamics simulations

21 January 2018

1 reference

Unfolding proteins by external forces and temperature: the importance of topology and energetics

21 January 2018

1 reference

Exploration of partially unfolded states of human alpha-lactalbumin by molecular dynamics simulation

21 January 2018

1 reference

Structure-derived potentials and protein simulations

21 January 2018

1 reference

Environment-dependent residue contact energies for proteins.

21 January 2018

1 reference

CHARMM: A program for macromolecular energy, minimization, and dynamics calculations

21 January 2018

1 reference

Crystal and molecular structure of the serine proteinase inhibitor CI-2 from barley seeds

21 January 2018

1 reference

Structure of a Fibronectin Type III Domain from Tenascin Phased by MAD Analysis of the Selenomethionyl Protein

21 January 2018

1 reference

Canonical dynamics: Equilibrium phase-space distributions

21 January 2018

1 reference

Native proteins are surface-molten solids: application of the Lindemann criterion for the solid versus liquid state

21 January 2018

1 reference

Structural correlations in protein folding funnels

21 January 2018

1 reference

A theoretical search for folding/unfolding nuclei in three-dimensional protein structures

21 January 2018

1 reference

First-principles calculation of the folding free energy of a three-helix bundle protein

21 January 2018

1 reference

Exploring the folding free energy surface of a three-helix bundle protein

21 January 2018

1 reference

Molecular picture of folding of a small α/β protein

21 January 2018

1 reference

How do small single-domain proteins fold?

21 January 2018

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Kinetics, thermodynamics and evolution of non-native interactions in a protein folding nucleus

21 January 2018

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Simulations of the structural and dynamical properties of denatured proteins: the “molten coil” state of bovine pancreatic trypsin inhibitor

21 January 2018

1 reference

Diffusion-limited contact formation in unfolded cytochrome c: estimating the maximum rate of protein folding

21 January 2018

1 reference

The fast protein folding problem

21 January 2018

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Three-dimensional structure of acylphosphatase. Refinement and structure analysis

21 January 2018

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1002/PROT.10089

Identifiers

DOI

10.1002/PROT.10089

1 reference

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9 December 2019

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