The mechanism of action of T7 DNA polymerase (Q77892158)

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9 December 2019

review article

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title

The mechanism of action of T7 DNA polymerase (English)

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9 December 2019

1

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9 December 2019

author name string

T Ellenberger

series ordinal

2

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9 December 2019

publication date

1 December 1998

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Current Opinion in Structural Biology

9 December 2019

published in

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9914251 AND SRC:MED&resulttype=core&format=json

9 December 2019

volume

8

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9914251 AND SRC:MED&resulttype=core&format=json

9 December 2019

issue

6

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9 December 2019

page(s)

704-712

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Function and structure relationships in DNA polymerases

9 December 2019

cites work

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Crystal structure of the large fragment of Thermus aquaticus DNA polymerase I at 2.5-A resolution: structural basis for thermostability

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Crystal structure of Thermus aquaticus DNA polymerase

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Structure of Taq polymerase with DNA at the polymerase active site

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Visualizing DNA replication in a catalytically active Bacillus DNA polymerase crystal

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Crystal structure of a bacteriophage T7 DNA replication complex at 2.2 Å resolution

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Processivity of DNA polymerases: two mechanisms, one goal

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A single residue in DNA polymerases of the Escherichia coli DNA polymerase I family is critical for distinguishing between deoxy- and dideoxyribonucleotides

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How E. coli DNA polymerase I (Klenow fragment) distinguishes between deoxy- and dideoxynucleotides

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A single side chain prevents Escherichia coli DNA polymerase I (Klenow fragment) from incorporating ribonucleotides

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Base miscoding and strand misalignment errors by mutator Klenow polymerases with amino acid substitutions at tyrosine 766 in the O helix of the fingers subdomain

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A thymidine triphosphate shape analog lacking Watson–Crick pairing ability is replicated with high sequence selectivity

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Side chains that influence fidelity at the polymerase active site of Escherichia coli DNA polymerase I (Klenow fragment)

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Crystal Structure of a pol α Family Replication DNA Polymerase from Bacteriophage RB69

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Structures of ternary complexes of rat DNA polymerase beta, a DNA template-primer, and ddCTP

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Crystal Structures of Human DNA Polymerase β Complexed with Gapped and Nicked DNA: Evidence for an Induced Fit Mechanism,

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Mechanistic aspects of enzymatic catalysis: lessons from comparison of RNA and protein enzymes

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How do kinases transfer phosphoryl groups?

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Mg2 –Mn2 clusters in enzyme-catalyzed phosphoryl-transfer reactions

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Structural basis for the 3'-5' exonuclease activity of Escherichia coli DNA polymerase I: a two metal ion mechanism

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Structural principles for the inhibition of the 3′-5′ exonuclease activity of Escherichia coli DNA polymerase I by phosphorothioates

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Unambiguous determination of the stereochemistry of nucleotidyl transfer catalyzed by DNA polymerase I from Escherichia coli

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7 January 2021

Stereochemical course of nucleotidyl transfer catalyzed by bacteriophage T7 induced DNA polymerase

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7 January 2021

Enzyme-Catalyzed Phosphoryl Transfer Reactions

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Mapping the transition state for ATP hydrolysis: implications for enzymatic catalysis

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An attempt to unify the structure of polymerases

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Crystal structures of the Klenow fragment of DNA polymerase I complexed with deoxynucleoside triphosphate and pyrophosphate

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Kinetic mechanism whereby DNA polymerase I (Klenow) replicates DNA with high fidelity

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7 January 2021

Kinetic mechanism of DNA polymerase I(Klenow fragment): identification of a second conformational change and evaluation of the internal equilibrium constant

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7 January 2021

Pre-steady-state kinetic analysis of processive DNA replication including complete characterization of an exonuclease-deficient mutant

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7 January 2021

An induced-fit kinetic mechanism for DNA replication fidelity: direct measurement by single-turnover kinetics

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Structure of DNA polymerase I Klenow fragment bound to duplex DNA

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Crystal structure of rat DNA polymerase beta: evidence for a common polymerase mechanism

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7 January 2021

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Effects of Mutations on the Partitioning of DNA Substrates between the Polymerase and 3‘−5‘ Exonuclease Sites of DNA Polymerase I (Klenow Fragment)

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7 January 2021

Dynamics of bacteriophage T4 DNA polymerase function: identification of amino acid residues that affect switching between polymerase and 3' --> 5' exonuclease activities

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7 January 2021

Amino acid changes in a unique sequence of bacteriophage T7 DNA polymerase alter the processivity of nucleotide polymerization.

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7 January 2021

The thioredoxin binding domain of bacteriophage T7 DNA polymerase confers processivity on Escherichia coli DNA polymerase I

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7 January 2021

10.1016/S0959-440X(98)80089-4

Identifiers

DOI

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9 December 2019

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