Zinc binding in proteins and solution: a simple but accurate nonbonded representation (Q70830917)

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14 October 2019

title

Zinc binding in proteins and solution: a simple but accurate nonbonded representation (English)

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14 October 2019

2

Karplus M

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14 October 2019

author name string

Stote RH

series ordinal

1

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14 October 2019

publication date

1 September 1995

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14 October 2019

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14 October 2019

volume

23

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14 October 2019

issue

1

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14 October 2019

page(s)

12-31

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Zinc Finger Domains: Hypotheses and Current Knowledge

14 October 2019

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Structure of thermolysin refined at 1.6 A resolution

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Ab initio molecular orbital study on the effects of zinc ion, its ligands and ionic amino acid residues for proton transfer energetics between Glu 270 and Zn co-ordinated water molecule in carboxypeptidase A

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Hydration of CO2 by carbonic anhydrase: intramolecular proton transfer between Zn2 -bound H2O and histidine 64 in human carbonic anhydrase II

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Structure, refinement, and function of carbonic anhydrase isozymes: refinement of human carbonic anhydrase I

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The OPLS [optimized potentials for liquid simulations] potential functions for proteins, energy minimizations for crystals of cyclic peptides and crambin

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Simulations of proteins in water

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The engineering of binding affinity at metal ion binding sites for the stabilization of proteins: subtilisin as a test case

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Computer simulation of the initial proton transfer step in human carbonic anhydrase I

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Carboxypeptidase A mechanisms

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X-ray absorption fine structure study of the active site of zinc and cobalt carboxypeptidase A in their solution and crystalline forms

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Dynamical structure of carboxypeptidase A

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11 October 2022

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Structural Biology of Zinc

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Numerical integration of the cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes

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Temperature dependence of dynamics of hydrated myoglobin. Comparison of force field calculations with neutron scattering data

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Refined structure of human carbonic anhydrase II at 2.0 A resolution

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Polar hydrogen positions in proteins: Empirical energy placement and neutron diffraction comparison

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Rational modification of enzyme catalysis by engineering surface charge

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Tailoring the pH dependence of enzyme catalysis using protein engineering

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Electrostatic effects on modification of charged groups in the active site cleft of subtilisin by protein engineering

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Binding of substrate CO2 to the active site of human carbonic anhydrase II: a molecular dynamics study

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11 October 2022

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Solvent effects on protein motion and protein effects on solvent motion. Dynamics of the active site region of lysozyme

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High-resolution (1.5 A) crystal structure of phospholipase C from Bacillus cereus

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Mechanism of carboxypeptidase A: hydration of a ketonic substrate analogue

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Evidence from X-ray absorption fine structure spectroscopy for significant differences in the structure of concanavalin A in solution and in the crystal

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Binding of a possible transition state analogue to the active site of carboxypeptidase A.

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Hydration of carbon dioxide by carbonic anhydrase: internal proton transfer of Zn2 -bound HCO3-

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11 October 2022

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X-ray absorption fine structure investigation of the zinc transition metal binding site of Zn concanavalin A in solution and in the crystal.

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11 October 2022

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Molecular dynamics characterization of the active cavity of carboxypeptidase A and some of its inhibitor adducts

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11 October 2022

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Structural basis of the action of thermolysin and related zinc peptidases

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11 October 2022

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Crystal and molecular structures of native and CTP-liganded aspartate carbamoyltransferase from Escherichia coli

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11 October 2022

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Refined crystal structure of carboxypeptidase A at 1.54 A resolution

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11 October 2022

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Electrostatic effects of charge perturbations introduced by metal oxidation in proteins. A theoretical analysis

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11 October 2022

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The carbonic anhydrases: widening perspectives on their evolution, expression and function

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11 October 2022

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Temperature dependence of the structure and dynamics of myoglobin. A simulation approach

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1002/PROT.340230104

Structural differences in solution and crystalline forms of met-myoglobin

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1002/PROT.340230104

Energy functions for peptides and proteins. I. Derivation of a consistent force field including the hydrogen bond from amide crystals

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1002/PROT.340230104

Insights into the function of the zinc hydroxide-Thr199-Glu106 hydrogen bonding network in carbonic anhydrases

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1002/PROT.340230104

Identifiers

DOI

10.1002/PROT.340230104

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8539245 AND SRC:MED&resulttype=core&format=json

14 October 2019

1 reference