Importance of a tRNA anticodon loop modification and a conserved, noncanonical anticodon stem pairing in for decoding (Q64228810)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30782843 AND SRC:MED&resulttype=core&format=json

24 April 2020

title

Importance of a tRNA anticodon loop modification and a conserved, noncanonical anticodon stem pairing in tRNACGGProfor decoding (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30782843 AND SRC:MED&resulttype=core&format=json

24 April 2020

0 references

0 references

0 references

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30782843 AND SRC:MED&resulttype=core&format=json

24 April 2020

author name string

Ha An Nguyen

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30782843 AND SRC:MED&resulttype=core&format=json

24 April 2020

Eric D Hoffer

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30782843 AND SRC:MED&resulttype=core&format=json

24 April 2020

language of work or name

English

0 references

publication date

19 February 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30782843 AND SRC:MED&resulttype=core&format=json

Journal of Biological Chemistry

24 April 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30782843 AND SRC:MED&resulttype=core&format=json

24 April 2020

volume

294

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30782843 AND SRC:MED&resulttype=core&format=json

24 April 2020

issue

14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30782843 AND SRC:MED&resulttype=core&format=json

24 April 2020

page(s)

5281-5291

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30782843 AND SRC:MED&resulttype=core&format=json

Insertion (sufB) in the anticodon loop or base substitution (sufC) in the anticodon stem of tRNAPro2fromSalmonella typhimuriuminduces suppression of frameshift mutations

24 April 2020

cites work

1 reference

12 December 2020

Wobble position modified nucleosides evolved to select transfer RNA codon recognition: A modified-wobble hypothesis

1 reference

12 December 2020

Conformation in solution of yeast tRNA(Asp) transcripts deprived of modified nucleotides.

1 reference

12 December 2020

Prevention of translational frameshifting by the modified nucleoside 1-methylguanosine

1 reference

12 December 2020

Transfer RNA modification

1 reference

12 December 2020

Suppressors of frameshift mutations in Salmonella typhimurium

1 reference

12 December 2020

Externally suppressible 1 "glycine" frameshift: possible quadruplet isomers for glycine and proline.

1 reference

12 December 2020

Restoration of In-phase Translation by an Unlinked Suppressor of a Frameshift Mutation in Salmonella typhimurium

1 reference

12 December 2020

Nucleotide sequences of three proline tRNAs fromSalmonella typhimurium

1 reference

12 December 2020

Deficiency of 1-methylguanosine in tRNA from Salmonella typhimurium induces frameshifting by quadruplet translocation

1 reference

12 December 2020

A double-filter method for nitrocellulose-filter binding: application to protein-nucleic acid interactions

1 reference

12 December 2020

Three modified nucleosides present in the anticodon stem and loop influence the in vivo aa-tRNA selection in a tRNA-dependent manner

1 reference

12 December 2020

Compilation of tRNA sequences and sequences of tRNA genes

1 reference

12 December 2020

A new model for phenotypic suppression of frameshift mutations by mutant tRNAs

1 reference

12 December 2020

The modification of the wobble base of tRNAGlu modulates the translation rate of glutamic acid codons in vivo

1 reference

12 December 2020

Stabilization of the anticodon stem-loop of tRNALys,3 by an A -C base-pair and by pseudouridine

1 reference

12 December 2020

The uridine in "U-turn": contributions to tRNA-ribosomal binding

1 reference

12 December 2020

Hypermodified nucleosides in the anticodon of tRNALys stabilize a canonical U-turn structure

1 reference

12 December 2020

Modified nucleoside dependent Watson-Crick and wobble codon binding by tRNALysUUU species

1 reference

12 December 2020

A primordial tRNA modification required for the evolution of life?

1 reference

12 December 2020

Improvement of reading frame maintenance is a common function for several tRNA modifications

1 reference

12 December 2020

Imbalance of tRNA(Pro) isoacceptors induces 1 frameshifting at near-cognate codons

1 reference

12 December 2020

Accurate translation of the genetic code depends on tRNA modified nucleosides.

1 reference

12 December 2020

Solution conformations of unmodified and A(37)N(6)-dimethylallyl modified anticodon stem-loops of Escherichia coli tRNA(Phe)

1 reference

12 December 2020

Universally conserved interactions between the ribosome and the anticodon stem-loop of A site tRNA important for translocation

1 reference

12 December 2020

Selection of tRNA by the ribosome requires a transition from an open to a closed form

1 reference

12 December 2020

Purine bases at position 37 of tRNA stabilize codon-anticodon interaction in the ribosomal A site by stacking and Mg2 -dependent interactions

1 reference

12 December 2020

Decoding the genome: a modified view

1 reference

12 December 2020

Contribution of the esterified amino acid to the binding of aminoacylated tRNAs to the ribosomal P- and A-sites

1 reference

12 December 2020

Structure of a purine-purine wobble base pair in the decoding center of the ribosome

1 reference

12 December 2020

The role of modifications in codon discrimination by tRNA(Lys)UUU.

1 reference

12 December 2020

Coot: model-building tools for molecular graphics

1 reference

12 December 2020

Idiosyncratic tuning of tRNAs to achieve uniform ribosome binding

1 reference

12 December 2020

Recognition and positioning of mRNA in the ribosome by tRNAs with expanded anticodons.

1 reference

12 December 2020

tRNA residues that have coevolved with their anticodon to ensure uniform and accurate codon recognition.

1 reference

12 December 2020

Structure of the 70S ribosome complexed with mRNA and tRNA

1 reference

12 December 2020

Codon Reading by tRNAAla with Modified Uridine in the Wobble Position

1 reference

12 December 2020

Structures of tRNAs with an expanded anticodon loop in the decoding center of the 30S ribosomal subunit

1 reference

12 December 2020

Mechanism for expanding the decoding capacity of transfer RNAs by modification of uridines

1 reference

12 December 2020

Peptidyl-prolyl-tRNA at the ribosomal P-site reacts poorly with puromycin

1 reference

12 December 2020

Modulation of the rate of peptidyl transfer on the ribosome by the nature of substrates

1 reference

12 December 2020

Slow peptide bond formation by proline and other N-alkylamino acids in translation

1 reference

12 December 2020

A gripping tale of ribosomal frameshifting: extragenic suppressors of frameshift mutations spotlight P-site realignment

1 reference

12 December 2020

A sequence element that tunes Escherichia coli tRNA(Ala)(GGC) to ensure accurate decoding.

1 reference

12 December 2020

Bases in the anticodon loop of tRNA(Ala)(GGC) prevent misreading

1 reference

12 December 2020

Contribution of ribosomal residues to P-site tRNA binding

1 reference

12 December 2020

What recent ribosome structures have revealed about the mechanism of translation

1 reference

12 December 2020

1 reference

12 December 2020

PHENIX: a comprehensive Python-based system for macromolecular structure solution

1 reference

12 December 2020

Structural aspects of messenger RNA reading frame maintenance by the ribosome

1 reference

12 December 2020

PoxA, YjeK, and Elongation Factor P Coordinately Modulate Virulence and Drug Resistance in Salmonella enterica

1 reference

12 December 2020

pH-sensitivity of the ribosomal peptidyl transfer reaction dependent on the identity of the A-site aminoacyl-tRNA.

1 reference

12 December 2020

A new understanding of the decoding principle on the ribosome

1 reference

12 December 2020

Translation elongation factor EF-P alleviates ribosome stalling at polyproline stretches.

1 reference

12 December 2020

EF-P is essential for rapid synthesis of proteins containing consecutive proline residues

1 reference

12 December 2020

(R)-β-lysine-modified elongation factor P functions in translation elongation.

1 reference

12 December 2020

Reorganization of an intersubunit bridge induced by disparate 16S ribosomal ambiguity mutations mimics an EF-Tu-bound state

1 reference

12 December 2020

Structural insights into 1 frameshifting promoted by expanded or modification-deficient anticodon stem loops

1 reference

12 December 2020

Structural insights into translational recoding by frameshift suppressor tRNASufJ.

1 reference

12 December 2020

Distribution and frequencies of post-transcriptional modifications in tRNAs

1 reference

12 December 2020

Mechanisms of mRNA frame maintenance and its subversion during translation of the genetic code

1 reference

12 December 2020

Post-transcriptional modifications to tRNA--a response to the genetic code degeneracy

1 reference

12 December 2020

Maintenance of protein synthesis reading frame by EF-P and m(1)G37-tRNA.

1 reference

12 December 2020

Novel base-pairing interactions at the tRNA wobble position crucial for accurate reading of the genetic code

1 reference

12 December 2020

Ribosomal frameshifting and transcriptional slippage: From genetic steganography and cryptography to adventitious use

1 reference

12 December 2020

Celebrating wobble decoding: Half a century and still much is new.

1 reference

12 December 2020

Structural Basis for Polyproline-Mediated Ribosome Stalling and Rescue by the Translation Elongation Factor EF-P.

1 reference

12 December 2020

MODOMICS: a database of RNA modification pathways. 2017 update

1 reference

12 December 2020

Alternative Mode of E-Site tRNA Binding in the Presence of a Downstream mRNA Stem Loop at the Entrance Channel

1 reference

12 December 2020

Mechanism of tRNA-mediated 1 ribosomal frameshifting

1 reference

12 December 2020

Ribosomal ambiguity (ram) mutations promote the open (off) to closed (on) transition and thereby increase miscoding

1 reference

12 December 2020

Identifiers

DOI

10.1074/JBC.RA119.007410

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30782843 AND SRC:MED&resulttype=core&format=json

24 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30782843 AND SRC:MED&resulttype=core&format=json

24 April 2020

PubMed publication ID

30782843

1 reference