Construction and benchmarking of a multi-ethnic reference panel for the imputation of HLA class I and II alleles. (Q62682526)

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16 April 2020

title

Construction and benchmarking of a multi-ethnic reference panel for the imputation of HLA class I and II alleles (English)

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B.K Thelma

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John D. Rioux

25

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Mareike Wendorff

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Jae Hee Cheon

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27

Steven R Brant

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Andre Franke

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23

Michiaki Kubo

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14

Reza Malekzadeh

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5

Lisa W Datta

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Gabrielle Boucher

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4

Eva Ellinghaus

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Frauke Degenhardt

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Vandana Midha

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Shifteh Abedian

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Michael Wittig

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John Schembri

6

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Siew C Ng

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Matthias Hübenthal

9

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David Ellinghaus

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Eun Suk Jung

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Wolfgang Lieb

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Pierre Ellul

16

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Ajit Sood

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Sunny H Wong

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Stefan Schreiber

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Keiko Yamazaki

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Tobias L Lenz

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publication date

1 June 2019

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16 April 2020

published in

Human Molecular Genetics

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volume

28

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issue

12

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page(s)

2078-2092

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Creative Commons Attribution-NonCommercial 4.0 International

16 April 2020

copyright license

start time

26 December 2018

1 reference

April 2022 Public Data File from Crossref

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1 reference

12 December 2020

The HLA-DRB9 gene and the origin of HLA-DR haplotypes

1 reference

12 December 2020

Diversity associated with the second expressed HLA-DRB locus in the human population

1 reference

12 December 2020

Major histocompatibility complex class II polymorphisms in primates

1 reference

12 December 2020

The HLA dictionary 2008: a summary of HLA-A, -B, -C, -DRB1/3/4/5, and -DQB1 alleles and their association with serologically defined HLA-A, -B, -C, -DR, and -DQ antigens

1 reference

12 December 2020

HLA genotyping in the international Type 1 Diabetes Genetics Consortium

1 reference

12 December 2020

Targeted Assembly of Short Sequence Reads

1 reference

12 December 2020

HLA-Cw*1202-B*5201-DRB1*1502 haplotype increases risk for ulcerative colitis but reduces risk for Crohn's disease

1 reference

12 December 2020

Multi-population classical HLA type imputation

1 reference

12 December 2020

HIBAG--HLA genotype imputation with attribute bagging.

1 reference

12 December 2020

Imputing amino acid polymorphisms in human leukocyte antigens

1 reference

12 December 2020

Fine-mapping the genetic association of the major histocompatibility complex in multiple sclerosis: HLA and non-HLA effects

1 reference

12 December 2020

Predicting HLA alleles from high-resolution SNP data in three Southeast Asian populations

1 reference

12 December 2020

HLA diversity in the 1000 genomes dataset

1 reference

12 December 2020

Construction and application of a Korean reference panel for imputing classical alleles and amino acids of human leukocyte antigen genes.

1 reference

12 December 2020

Allele frequency net 2015 update: new features for HLA epitopes, KIR and disease and HLA adverse drug reaction associations

1 reference

12 December 2020

The IPD and IMGT/HLA database: allele variant databases

1 reference

12 December 2020

High-density mapping of the MHC identifies a shared role for HLA-DRB1*01:03 in inflammatory bowel diseases and heterozygous advantage in ulcerative colitis

1 reference

12 December 2020

Development of a high-resolution NGS-based HLA-typing and analysis pipeline

1 reference

12 December 2020

HLAreporter: a tool for HLA typing from next generation sequencing data

1 reference

12 December 2020

Construction of a population-specific HLA imputation reference panel and its application to Graves' disease risk in Japanese

1 reference

12 December 2020

Association analyses identify 38 susceptibility loci for inflammatory bowel disease and highlight shared genetic risk across populations

1 reference

12 December 2020

Characterization of genetic loci that affect susceptibility to inflammatory bowel diseases in African Americans

1 reference

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A global reference for human genetic variation

1 reference

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Genotype Imputation with Millions of Reference Samples

1 reference

12 December 2020

Genome-Wide Association Study Identifies African-Specific Susceptibility Loci in African Americans With Inflammatory Bowel Disease.

1 reference

12 December 2020

Inflammatory Bowel Disease: A Global Disease That Needs a Broader Ensemble of Populations.

1 reference

12 December 2020

HLA variation and disease.

1 reference

12 December 2020

Identifiers

DOI

10.1093/HMG/DDY443

1 reference

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16 April 2020

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16 April 2020

PubMed publication ID

30590525

1 reference