A Novel Method for Identifying Essential Genes by Fusing Dynamic Protein⁻Protein Interactive Networks (Q61801551)

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18 April 2020

title

A Novel Method for Identifying Essential Genes by Fusing Dynamic Protein⁻Protein Interactive Networks (English)

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18 April 2020

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18 April 2020

author name string

Fengyu Zhang

1

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18 April 2020

Yunfei Yang

3

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18 April 2020

Wei Dai

4

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18 April 2020

Junrong Song

5

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18 April 2020

language of work or name

English

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publication date

8 January 2019

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18 April 2020

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18 April 2020

volume

10

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18 April 2020

issue

1

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Creative Commons Attribution 4.0 International

18 April 2020

page(s)

31

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copyright license

start time

8 January 2019

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April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

SGD: Saccharomyces Genome Database

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12 December 2020

Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis

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12 December 2020

Lethality and centrality in protein networks

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12 December 2020

DIP, the Database of Interacting Proteins: a research tool for studying cellular networks of protein interactions

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12 December 2020

Evolutionary rate in the protein interaction network

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12 December 2020

Essential genes are more evolutionarily conserved than are nonessential genes in bacteria

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12 December 2020

Essential Genes Are More Evolutionarily Conserved Than Are Nonessential Genes in Bacteria

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12 December 2020

Centers of complex networks

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12 December 2020

Gene loss, protein sequence divergence, gene dispensability, expression level, and interactivity are correlated in eukaryotic evolution

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12 December 2020

Comparison of computational methods for the identification of cell cycle-regulated genes

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12 December 2020

Comparative genomics of centrality and essentiality in three eukaryotic protein-interaction networks

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12 December 2020

Conserved patterns of protein interaction in multiple species

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12 December 2020

High-betweenness proteins in the yeast protein interaction network

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12 December 2020

Subgraph centrality in complex networks

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12 December 2020

Virtual identification of essential proteins within the protein interaction network of yeast

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12 December 2020

MIPS: analysis and annotation of proteins from whole genomes in 2005.

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12 December 2020

Differences in the evolutionary history of disease genes affected by dominant or recessive mutations

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12 December 2020

Evolutionary and physiological importance of hub proteins

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12 December 2020

Targeting virulence: a new paradigm for antimicrobial therapy

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12 December 2020

DEG 5.0, a database of essential genes in both prokaryotes and eukaryotes

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12 December 2020

Finding Significantly Expressed genes from time-course expression profiles

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12 December 2020

Toward the dynamic interactome: it's about time

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12 December 2020

A comparison of the functional modules identified from time course and static PPI network data

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12 December 2020

Identification of Essential Proteins Based on Edge Clustering Coefficient

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12 December 2020

A new essential protein discovery method based on the integration of protein-protein interaction and gene expression data

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12 December 2020

Iteration method for predicting essential proteins based on orthology and protein-protein interaction networks

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12 December 2020

Computational approaches to predicting essential proteins: a survey

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12 December 2020

Construction and application of dynamic protein interaction network based on time course gene expression data

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12 December 2020

Dynamic protein interaction network construction and applications

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12 December 2020

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12 December 2020

Detecting protein complexes from active protein interaction networks constructed with dynamic gene expression profiles

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12 December 2020

Identifying essential proteins from active PPI networks constructed with dynamic gene expression

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12 December 2020

Rechecking the Centrality-Lethality Rule in the Scope of Protein Subcellular Localization Interaction Networks

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12 December 2020

Identification of Essential Proteins Based on a New Combination of Local Interaction Density and Protein Complexes

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12 December 2020

Predicting Essential Proteins Based on Weighted Degree Centrality

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12 December 2020

Identification of Protein Complexes Using Weighted PageRank-Nibble Algorithm and Core-Attachment Structure

1 reference

12 December 2020

UDoNC: An Algorithm for Identifying Essential Proteins Based on Protein Domains and Protein-Protein Interaction Networks

1 reference

12 December 2020

Predicting Essential Genes and Proteins Based on Machine Learning and Network Topological Features: A Comprehensive Review

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12 December 2020

Predicting essential proteins based on subcellular localization, orthology and PPI networks

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12 December 2020

Construction of refined protein interaction network for predicting essential proteins.

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12 December 2020

Predicting Protein Functions by Using Unbalanced Random Walk Algorithm on Three Biological Networks

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12 December 2020

Detecting Essential Proteins Based on Network Topology, Gene Expression Data and Gene Ontology Information

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12 December 2020

Identification of protein complexes by using a spatial and temporal active protein interaction network

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12 December 2020

Identifiers

DOI

10.3390/GENES10010031

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30626157 AND SRC:MED&resulttype=core&format=json

18 April 2020

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30626157 AND SRC:MED&resulttype=core&format=json

18 April 2020

PubMed publication ID

30626157

1 reference