A structurally heterogeneous transition state underlies coupled binding and folding of disordered proteins (Q61452810)

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12 April 2020

title

A structurally heterogeneous transition state underlies coupled binding and folding of disordered proteins (English)

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1

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Per Jemth

5

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12 April 2020

Carlo Camilloni

6

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author name string

Eva Andersson

2

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12 April 2020

Jakob Dogan

3

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Stefano Gianni

4

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language of work or name

English

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publication date

4 December 2018

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Journal of Biological Chemistry

12 April 2020

published in

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volume

294

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issue

4

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page(s)

1230-1239

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12 April 2020

cites work

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The Structure of the Transition State for Folding of Chymotrypsin Inhibitor 2 Analysed by Protein Engineering Methods: Evidence for a Nucleation-condensation Mechanism for Protein Folding

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Impact of local and non-local interactions on thermodynamics and kinetics of protein folding

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12 December 2020

Specific nucleus as the transition state for protein folding: evidence from the lattice model.

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12 December 2020

Application of physical organic chemistry to engineered mutants of proteins: Hammond postulate behavior in the transition state of protein folding

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12 December 2020

Three key residues form a critical contact network in a protein folding transition state

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12 December 2020

Mutual synergistic folding in recruitment of CBP/p300 by p160 nuclear receptor coactivators

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12 December 2020

Determination of a transition state at atomic resolution from protein engineering data

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12 December 2020

Self-consistent determination of the transition state for protein folding: application to a fibronectin type III domain

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12 December 2020

Hammond behavior versus ground state effects in protein folding: evidence for narrow free energy barriers and residual structure in unfolded states

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12 December 2020

Transition states for protein folding have native topologies despite high structural variability

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12 December 2020

Phi-value analysis and the nature of protein-folding transition states

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12 December 2020

The study of bimolecular reactions under non-pseudo-first order conditions

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12 December 2020

A PDZ domain recapitulates a unifying mechanism for protein folding

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12 December 2020

Canonical sampling through velocity rescaling

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12 December 2020

Mechanism of coupled folding and binding of an intrinsically disordered protein

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12 December 2020

Parameters for the Description of Transition States

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12 December 2020

Improved prediction of protein side-chain conformations with SCWRL4

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Conformational selection in the molten globule state of the nuclear coactivator binding domain of CBP

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Protein Simulations with an Optimized Water Model: Cooperative Helix Formation and Temperature-Induced Unfolded State Collapse

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12 December 2020

Kinetic recognition of the retinoblastoma tumor suppressor by a specific protein target

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12 December 2020

Side-chain interactions form late and cooperatively in the binding reaction between disordered peptides and PDZ domains.

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12 December 2020

Multiparametric analysis of intrinsically disordered proteins: looking at intrinsic disorder through compound eyes

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12 December 2020

Residual structures, conformational fluctuations, and electrostatic interactions in the synergistic folding of two intrinsically disordered proteins

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12 December 2020

Fast association and slow transitions in the interaction between two intrinsically disordered protein domains

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12 December 2020

A Folded Excited State of Ligand-Free Nuclear Coactivator Binding Domain (NCBD) Underlies Plasticity in Ligand Recognition

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12 December 2020

The transition state structure for coupled binding and folding of disordered protein domains

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12 December 2020

Structure of the transition state for the binding of c-Myb and KIX highlights an unexpected order for a disordered system

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12 December 2020

A frustrated binding interface for intrinsically disordered proteins

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12 December 2020

Helical Propensity in an Intrinsically Disordered Protein Accelerates Ligand Binding

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12 December 2020

Discriminating binding mechanisms of an intrinsically disordered protein via a multi-state coarse-grained model

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12 December 2020

Understanding the frustration arising from the competition between function, misfolding, and aggregation in a globular protein

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12 December 2020

Interplay between partner and ligand facilitates the folding and binding of an intrinsically disordered protein

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12 December 2020

Visualizing the molecular recognition trajectory of an intrinsically disordered protein using multinuclear relaxation dispersion NMR.

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12 December 2020

Structure and dynamics of the MKK7-JNK signaling complex

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12 December 2020

Binding Rate Constants Reveal Distinct Features of Disordered Protein Domains

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12 December 2020

Coupled binding and folding of intrinsically disordered proteins: what can we learn from kinetics?

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12 December 2020

Molecular Recognition by Templated Folding of an Intrinsically Disordered Protein

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12 December 2020

Protein Frustratometer 2: a tool to localize energetic frustration in protein molecules, now with electrostatics

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12 December 2020

Mutational Analysis of the Binding-Induced Folding Reaction of the Mixed-Lineage Leukemia Protein to the KIX Domain

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12 December 2020

Activation Barrier-Limited Folding and Conformational Sampling of a Dynamic Protein Domain

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12 December 2020

Emergence and evolution of an interaction between intrinsically disordered proteins

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12 December 2020

Analyzing the Folding and Binding Steps of an Intrinsically Disordered Protein by Protein Engineering

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12 December 2020

Native Hydrophobic Binding Interactions at the Transition State for Association between the TAZ1 Domain of CBP and the Disordered TAD-STAT2 Are Not a Requirement

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12 December 2020

pKID Binds to KIX via an Unstructured Transition State with Nonnative Interactions.

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12 December 2020

Fuzziness in Protein Interactions-A Historical Perspective.

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12 December 2020

Folding and binding pathways of BH3-only proteins are encoded within their intrinsically disordered sequence, not templated by partner proteins.

1 reference

12 December 2020

The transition state structure for binding between TAZ1 of CBP and the disordered Hif-1α CAD.

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12 December 2020

A proline switch explains kinetic heterogeneity in a coupled folding and binding reaction

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12 December 2020

Fold or not to fold upon binding - does it really matter?

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12 December 2020

Transition path times of coupled folding and binding reveal the formation of an encounter complex

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12 December 2020

Identifiers

DOI

10.1074/JBC.RA118.005854

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12 April 2020

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12 April 2020

PubMed publication ID

30514761

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