Estimation of Phylogeny and Invariant Sites under the General Markov Model of Nucleotide Sequence Evolution (Q58468299)

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29 December 2019

title

Estimation of phylogeny and invariant sites under the general Markov model of nucleotide sequence evolution (English)

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29 December 2019

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0 references

1

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29 December 2019

Lars S. Jermiin

series ordinal

3

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29 December 2019

2

John Robinson

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29 December 2019

publication date

1 April 2007

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29 December 2019

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29 December 2019

volume

56

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29 December 2019

issue

2

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29 December 2019

page(s)

155-162

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Matched-pairs tests of homogeneity with applications to homologous nucleotide sequences

29 December 2019

cites work

1 reference

https://api.crossref.org/works/10.1080/10635150701247921

Bias in phylogenetic reconstruction of vertebrate rhodopsin sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1080/10635150701247921

Effects of nucleotide composition bias on the success of the parsimony criterion in phylogenetic inference

21 January 2018

1 reference

https://api.crossref.org/works/10.1080/10635150701247921

Modeling compositional heterogeneity

21 January 2018

1 reference

https://api.crossref.org/works/10.1080/10635150701247921

Compositional bias may affect both DNA-based and protein-based phylogenetic reconstructions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080/10635150701247921

Inferring phylogenies from DNA sequences of unequal base compositions

21 January 2018

1 reference

https://api.crossref.org/works/10.1080/10635150701247921

Inferring pattern and process: maximum-likelihood implementation of a nonhomogeneous model of DNA sequence evolution for phylogenetic analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1080/10635150701247921

A nonhyperthermophilic common ancestor to extant life forms

21 January 2018

1 reference

https://api.crossref.org/works/10.1080/10635150701247921

Statistical tests of models of DNA substitution

21 January 2018

1 reference

https://api.crossref.org/works/10.1080/10635150701247921

Likelihood-based tests of topologies in phylogenetics

21 January 2018

1 reference

https://api.crossref.org/works/10.1080/10635150701247921

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

21 January 2018

1 reference

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The phylogeny of proteobacteria: relationships to other eubacterial phyla and eukaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1080/10635150701247921

Dating of the human-ape splitting by a molecular clock of mitochondrial DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1080/10635150701247921

Tracing the decay of the historical signal in biological sequence data

21 January 2018

1 reference

https://api.crossref.org/works/10.1080/10635150701247921

Application of phylogenetic networks in evolutionary studies

21 January 2018

1 reference

https://api.crossref.org/works/10.1080/10635150701247921

The Biasing Effect of Compositional Heterogeneity on Phylogenetic Estimates May be Underestimated

21 January 2018

1 reference

https://api.crossref.org/works/10.1080/10635150701247921

DPRml: distributed phylogeny reconstruction by maximum likelihood.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080/10635150701247921

A new method for calculating evolutionary substitution rates

21 January 2018

1 reference

https://api.crossref.org/works/10.1080/10635150701247921

Evolution of chlorophyll and bacteriochlorophyll: the problem of invariant sites in sequence analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1080/10635150701247921

A covariotide model explains apparent phylogenetic structure of oxygenic photosynthetic lineages.

21 January 2018

1 reference

https://api.crossref.org/works/10.1080/10635150701247921

Heterogeneity in the substitution process of amino acid sites of proteins coded for by mitochondrial DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1080/10635150701247921

The comparison of the confidence regions in phylogeny

21 January 2018

1 reference

https://api.crossref.org/works/10.1080/10635150701247921

Estimating the fraction of invariable codons with a capture-recapture method

21 January 2018

1 reference

https://api.crossref.org/works/10.1080/10635150701247921

Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: approximate methods

21 January 2018

1 reference

https://api.crossref.org/works/10.1080/10635150701247921

The effect of topology on estimates of among-site rate variation

21 January 2018

1 reference

https://api.crossref.org/works/10.1080/10635150701247921

10.1080/10635150701247921

21 January 2018

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17454972 AND SRC:MED&resulttype=core&format=json

29 December 2019

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