Why phosphoproteomics is still a challenge (Q57842145)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25800119 AND SRC:MED&resulttype=core&format=json

3 March 2020

title

Why phosphoproteomics is still a challenge (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25800119 AND SRC:MED&resulttype=core&format=json

3 March 2020

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25800119 AND SRC:MED&resulttype=core&format=json

3 March 2020

René P. Zahedi

series ordinal

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25800119 AND SRC:MED&resulttype=core&format=json

3 March 2020

author name string

Margherita Dell'Aica

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25800119 AND SRC:MED&resulttype=core&format=json

3 March 2020

Fiorella A Solari

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25800119 AND SRC:MED&resulttype=core&format=json

3 March 2020

publication date

1 June 2015

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25800119 AND SRC:MED&resulttype=core&format=json

3 March 2020

number of pages

7

1 reference

based on heuristic

inferred from page(s)

published in

Molecular BioSystems

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25800119 AND SRC:MED&resulttype=core&format=json

3 March 2020

volume

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25800119 AND SRC:MED&resulttype=core&format=json

3 March 2020

issue

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25800119 AND SRC:MED&resulttype=core&format=json

3 March 2020

page(s)

1487-1493

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25800119 AND SRC:MED&resulttype=core&format=json

What can proteomics tell us about platelets?

3 March 2020

cites work

1 reference

State-of-the-art in phosphoproteomics

21 January 2018

1 reference

The use of elemental mass spectrometry in phosphoproteomic applications.

21 January 2018

1 reference

Quantitative measurement of phosphopeptides and proteins via stable isotope labeling in Arabidopsis and functional phosphoproteomic strategies

21 January 2018

1 reference

Impact of digestion conditions on phosphoproteomics.

21 January 2018

1 reference

Improved detection of multi-phosphorylated peptides in the presence of phosphoric acid in liquid chromatography/mass spectrometry

21 January 2018

1 reference

Ethylenediaminetetraacetic acid increases identification rate of phosphoproteomics in real biological samples

21 January 2018

1 reference

Citrate boosts the performance of phosphopeptide analysis by UPLC-ESI-MS/MS.

21 January 2018

1 reference

A probability-based approach for high-throughput protein phosphorylation analysis and site localization

21 January 2018

1 reference

Phosphopeptide fragmentation and analysis by mass spectrometry

21 January 2018

1 reference

Evaluation of gas-phase rearrangement and competing fragmentation reactions on protein phosphorylation site assignment using collision induced dissociation-MS/MS and MS3.

21 January 2018

1 reference

The next level of complexity: crosstalk of posttranslational modifications.

21 January 2018

1 reference

Phosphoproteomics--more than meets the eye.

21 January 2018

1 reference

Mechanisms of specificity in protein phosphorylation

21 January 2018

1 reference

Global, in vivo, and site-specific phosphorylation dynamics in signaling networks

21 January 2018

1 reference

Time-resolved characterization of cAMP/PKA-dependent signaling reveals that platelet inhibition is a concerted process involving multiple signaling pathways.

21 January 2018

1 reference

Ischemia in tumors induces early and sustained phosphorylation changes in stress kinase pathways but does not affect global protein levels

21 January 2018

1 reference

Universal sample preparation method for proteome analysis

21 January 2018

1 reference

Sample preparation and digestion for proteomic analyses using spin filters

21 January 2018

1 reference

Protein carbamylation: In vivo modification or in vitro artefact?

21 January 2018

1 reference

Artifactual sulfation of silver-stained proteins: implications for the assignment of phosphorylation and sulfation sites

21 January 2018

1 reference

Systematic and quantitative comparison of digest efficiency and specificity reveals the impact of trypsin quality on MS-based proteomics

21 January 2018

1 reference

Protein digestion: an overview of the available techniques and recent developments

21 January 2018

1 reference

Absolute quantification of protein and post-translational modification abundance with stable isotope-labeled synthetic peptides

21 January 2018

1 reference

Assay development for the determination of phosphorylation stoichiometry using multiple reaction monitoring methods with and without phosphatase treatment: application to breast cancer signaling pathways

21 January 2018

1 reference

Strong cation exchange-based fractionation of Lys-N-generated peptides facilitates the targeted analysis of post-translational modifications

21 January 2018

1 reference

Increasing phosphoproteomic coverage through sequential digestion by complementary proteases.

21 January 2018

1 reference

A protease for 'middle-down' proteomics

21 January 2018

1 reference

Phosphoproteome analysis by mass spectrometry and its application to Saccharomyces cerevisiae

21 January 2018

1 reference

Robust phosphoproteome enrichment using monodisperse microsphere-based immobilized titanium (IV) ion affinity chromatography

21 January 2018

1 reference

Selective Isolation at the Femtomole Level of Phosphopeptides from Proteolytic Digests Using 2D-NanoLC-ESI-MS/MS and Titanium Oxide Precolumns

21 January 2018

1 reference

Phosphoproteomic analysis of the developing mouse brain

21 January 2018

1 reference

Depletion of acidic phosphopeptides by SAX to improve the coverage for the detection of basophilic kinase substrates.

21 January 2018

1 reference

Electrostatic repulsion hydrophilic interaction chromatography for isocratic separation of charged solutes and selective isolation of phosphopeptides

21 January 2018

1 reference

Highly sensitive phosphoproteomics by tailoring solid-phase extraction to electrostatic repulsion-hydrophilic interaction chromatography

21 January 2018

1 reference

Immunoaffinity profiling of tyrosine phosphorylation in cancer cells

21 January 2018

1 reference

Specific phosphopeptide enrichment with immobilized titanium ion affinity chromatography adsorbent for phosphoproteome analysis

21 January 2018

1 reference

Online Nanoflow Multidimensional Fractionation for High Efficiency Phosphopeptide Analysis

21 January 2018

1 reference

Fast, Efficient, and Quality-Controlled Phosphopeptide Enrichment from Minute Sample Amounts Using Titanium Dioxide

21 January 2018

1 reference

Reversed-phase-reversed-phase liquid chromatography approach with high orthogonality for multidimensional separation of phosphopeptides

21 January 2018

1 reference

Formation of phosphopeptide-metal ion complexes in liquid chromatography/electrospray mass spectrometry and their influence on phosphopeptide detection

21 January 2018

1 reference

Phosphorylation analysis by mass spectrometry: myths, facts, and the consequences for qualitative and quantitative measurements

21 January 2018

1 reference

Peptide and protein sequence analysis by electron transfer dissociation mass spectrometry

21 January 2018

1 reference

Unambiguous phosphosite localization using electron-transfer/higher-energy collision dissociation (EThcD)

21 January 2018

1 reference

Confident phosphorylation site localization using the Mascot Delta Score

21 January 2018

1 reference

Universal and confident phosphorylation site localization using phosphoRS.

21 January 2018

1 reference

D-score: a search engine independent MD-score.

21 January 2018

1 reference

Comparison of alternative MS/MS and bioinformatics approaches for confident phosphorylation site localization

21 January 2018

1 reference

ProteomeXchange provides globally coordinated proteomics data submission and dissemination

21 January 2018

1 reference

PRIDE: the proteomics identifications database

21 January 2018

1 reference

PeptideShaker enables reanalysis of MS-derived proteomics data sets.

21 January 2018

1 reference

Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents

21 January 2018

1 reference

Tandem Mass Tags: A Novel Quantification Strategy for Comparative Analysis of Complex Protein Mixtures by MS/MS

21 January 2018

1 reference

Amino acid residue specific stable isotope labeling for quantitative proteomics

21 January 2018

1 reference

Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics

21 January 2018

1 reference

The good, the bad, the ugly: validating the mass spectrometric analysis of modified peptides

21 January 2018

1 reference

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

21 January 2018

1 reference

Single-step enrichment by Ti4 -IMAC and label-free quantitation enables in-depth monitoring of phosphorylation dynamics with high reproducibility and temporal resolution.

21 January 2018

1 reference

21 January 2018

Identifiers

DOI

10.1039/C5MB00024F

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25800119 AND SRC:MED&resulttype=core&format=json

3 March 2020

1 reference