Structure-based working model of SecDF, a proton-driven bacterial protein translocation factor. (Q55282553)

30 June 2018

4 references

2 November 2019

20 November 2019

15 December 2019

2 November 2020

Structure-based working model of SecDF, a proton-driven bacterial protein translocation factor. (English)

1 reference

30 June 2018

1 reference

2 November 2019

1 reference

20 November 2019

1 reference

15 December 2019

1 reference

2 November 2020

Tomoya Tsukazaki

1

1 reference

30 June 2018

publication date

1 June 2018

5 references

30 June 2018

FEMS Microbiology Letters

2 November 2019

20 November 2019

15 December 2019

2 November 2020

5 references

30 June 2018

2 November 2019

20 November 2019

15 December 2019

2 November 2020

365

1 reference

30 June 2018

issue

12

1 reference

30 June 2018

Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International

copyright license

4 references

2 November 2019

20 November 2019

15 December 2019

Dissecting structures and functions of SecA-only protein-conducting channels: ATPase, pore structure, ion channel activity, protein translocation, and interaction with SecYEG/SecDF•YajC.

2 November 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

Structural and Mechanistic Insights into Protein Translocation

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

The force-sensing peptide VemP employs extreme compaction and secondary structure formation to induce ribosomal stalling

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

Tunnel Formation Inferred from the I-Form Structures of the Proton-Driven Protein Secretion Motor SecDF.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

Dissecting the molecular organization of the translocon-associated protein complex.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

A central cavity within the holo-translocon suggests a mechanism for membrane protein insertion

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

Protein export through the bacterial Sec pathway.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

Two-way communication between SecY and SecA suggests a Brownian ratchet mechanism for protein translocation

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

Evolutionary evidence on suitability of SecD as a target for development of antibacterial agents against Staphylococcus aureus

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

Crystal structure of a substrate-engaged SecY protein-translocation channel

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

Structures of the E. coli translating ribosome with SRP and its receptor and with the translocon

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

Crystal Structures of SecYEG in Lipidic Cubic Phase Elucidate a Precise Resting and a Peptide-Bound State

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

Structure of the native Sec61 protein-conducting channel

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

Nascent chain-monitored remodeling of the Sec machinery for salinity adaptation of marine bacteria.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

YidC/Alb3/Oxa1 Family of Insertases

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

Structural basis of RND-type multidrug exporters

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

Crystal structure of Escherichia coli YidC, a membrane protein chaperone and insertase.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

Protein transport into the human endoplasmic reticulum

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

Structure of the Mammalian Ribosome-Sec61 Complex to 3.4 Å Resolution

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

Visualization of a polytopic membrane protein during SecY-mediated membrane insertion

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

Structural basis of Sec-independent membrane protein insertion by YidC.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

SecA-mediated targeting and translocation of secretory proteins.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

Structures of the Sec61 complex engaged in nascent peptide translocation or membrane insertion

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

Structures of intermediate transport states of ZneA, a Zn(II)/proton antiporter

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

Structure of the SecY channel during initiation of protein translocation

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

Structure and function of a membrane component SecDF that enhances protein export

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

Lateral opening of a translocon upon entry of protein suggests the mechanism of insertion into membranes

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

Conformational transition of Sec machinery inferred from bacterial SecYE structures

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

Structure of a complex of the ATPase SecA and the protein-translocation channel

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

Crystal structure of AcrB in complex with a single transmembrane subunit reveals another twist

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

Archaeal and bacterial SecD and SecF homologs exhibit striking structural and functional conservation.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

Inactivation of protein translocation by cold-sensitive mutations in the yajC-secDF operon

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

X-ray structure of a protein-conducting channel

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

The RND permease superfamily: an ancient, ubiquitous and diverse family that includes human disease and development proteins.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

The SecDFyajC domain of preprotein translocase controls preprotein movement by regulating SecA membrane cycling

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

SecD is involved in the release of translocated secretory proteins from the cytoplasmic membrane of Escherichia coli

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

SecD and SecF facilitate protein export in Escherichia coli.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

SecD and SecF are required for the proton electrochemical gradient stimulation of preprotein translocation

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

Genetic and molecular characterization of the Escherichia coli secD operon and its products

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

secD, a new gene involved in protein export in Escherichia coli

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

The secD locus of E. coli codes for two membrane proteins required for protein export

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

Structural basis for coupling protein transport and N-glycosylation at the mammalian endoplasmic reticulum.

3 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

Remote Coupled Drastic β-Barrel to β-Sheet Transition of the Protein Translocation Motor

12 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

Identification and characterization of a translation arrest motif in VemP by systematic mutational analysis.

12 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

Structure of YidC from Thermotoga maritima and its implications for YidC-mediated membrane protein insertion

12 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

Identification of Oxa1 Homologs Operating in the Eukaryotic Endoplasmic Reticulum

12 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

A photo-cross-linking approach to monitor folding and assembly of newly synthesized proteins in a living cell.

12 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

Involvement of SecDF and YidC in the membrane insertion of M13 procoat mutants.

12 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

SecDFyajC forms a heterotetrameric complex with YidC.

12 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

SecA membrane cycling at SecYEG is driven by distinct ATP binding and hydrolysis events and is regulated by SecD and SecF.

12 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5974789

A temperature-sensitive mutant of E. coli exhibiting slow processing of exported proteins

12 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/29718185

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

YidC mediates membrane protein insertion in bacteria

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/29718185

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Evolution of the prokaryotic protein translocation complex: a comparison of archaeal and bacterial versions of SecDF

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/29718185

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/FEMSLE/FNY112

1 reference

30 June 2018

PMC publication ID

5974789

1 reference

30 June 2018

PubMed publication ID

29718185

1 reference

30 June 2018