Toward sequencing cotton (Gossypium) genomes. (Q54301690)

27 May 2018

title

Toward sequencing cotton (Gossypium) genomes. (English)

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27 May 2018

author

Brian Scheffler

2

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27 May 2018

David M. Stelly

8

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27 May 2018

Chen Xiao-Ya

Xiaoya Chen

7

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Elizabeth S. Dennis

3

Elizabeth Dennis

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27 May 2018

Jonathan F. Wendel

33

Jonathan F Wendel

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27 May 2018

Tianzhen Zhang

5

Tianzhen Zhang

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27 May 2018

Wangzhen Guo

6

Wangzhen Guo

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27 May 2018

Andrew H Paterson

34

Andrew H Paterson

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27 May 2018

Tony Arioli

11

Tony Arioli

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27 May 2018

Barbara A Triplett

4

Barbara A Triplett

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27 May 2018

author name string

Z Jeffrey Chen

1

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27 May 2018

Pablo D Rabinowicz

9

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27 May 2018

Christopher D Town

10

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27 May 2018

Curt Brubaker

12

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27 May 2018

Roy G Cantrell

13

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27 May 2018

Jean-Marc Lacape

14

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27 May 2018

Mauricio Ulloa

15

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27 May 2018

Peng Chee

16

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27 May 2018

Alan R Gingle

17

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27 May 2018

Candace H Haigler

18

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27 May 2018

Richard Percy

19

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27 May 2018

Sukumar Saha

20

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27 May 2018

Thea Wilkins

21

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27 May 2018

Robert J Wright

22

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27 May 2018

Allen Van Deynze

23

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27 May 2018

Yuxian Zhu

24

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27 May 2018

Shuxun Yu

25

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27 May 2018

Ibrokhim Abdurakhmonov

26

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27 May 2018

Ishwarappa Katageri

27

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27 May 2018

P Ananda Kumar

28

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27 May 2018

Mehboob-Ur-Rahman

29

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27 May 2018

Yusuf Zafar

30

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27 May 2018

John Z Yu

31

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27 May 2018

Russell J Kohel

32

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27 May 2018

language of work or name

English

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publication date

1 December 2007

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27 May 2018

number of pages

8

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inferred from page(s)

published in

Plant Physiology

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27 May 2018

volume

145

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27 May 2018

issue

4

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27 May 2018

page(s)

1303-1310

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27 May 2018

Detection and mapping of homologous and homoeologous segments in homoeologous groups of allotetraploid cotton by BAC-FISH.

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151711

Analysis of gene expression in cotton fiber initials

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151711

A microsatellite-based, gene-rich linkage map reveals genome structure, function and evolution in Gossypium

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151711

Integrative mapping of Gossypium hirsutum L. by meiotic fluorescent in situ hybridization of a tandemly repetitive sequence (B77).

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151711

Spotted cotton oligonucleotide microarrays for gene expression analysis

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151711

Genetic and epigenetic mechanisms for gene expression and phenotypic variation in plant polyploids

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151711

Whole-genome re-sequencing

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151711

Differential lineage-specific amplification of transposable elements is responsible for genome size variation in Gossypium

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151711

Accumulation of genome-specific transcripts, transcription factors and phytohormonal regulators during early stages of fiber cell development in allotetraploid cotton

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151711

CMD: a Cotton Microsatellite Database resource for Gossypium genomics

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151711

Complete assignment of the chromosomes of Gossypium hirsutum L. by translocation and fluorescence in situ hybridization mapping

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151711

Leafing through the genomes of our major crop plants: strategies for capturing unique information

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151711

A global assembly of cotton ESTs.

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151711

Transcriptome profiling, molecular biological, and physiological studies reveal a major role for ethylene in cotton fiber cell elongation

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151711

Expression profiling identifies genes expressed early during lint fibre initiation in cotton

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151711

Developmental and gene expression analyses of a cotton naked seed mutant.

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151711

Comparative genomics of Gossypium and Arabidopsis: unraveling the consequences of both ancient and recent polyploidy

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151711

Estimation of the nuclear DNA content of gossypium species

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151711

Functional genomics of cell elongation in developing cotton fibers.

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151711

A 3347-locus genetic recombination map of sequence-tagged sites reveals features of genome organization, transmission and evolution of cotton (Gossypium).

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151711

Wide coverage of the tetraploid cotton genome using newly developed microsatellite markers

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151711

Rate variation among nuclear genes and the age of polyploidy in Gossypium

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151711

Genes duplicated by polyploidy show unequal contributions to the transcriptome and organ-specific reciprocal silencing

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151711

Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151711

Cotton fiber growth in planta and in vitro. Models for plant cell elongation and cell wall biogenesis

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151711

Polyploid formation in cotton is not accompanied by rapid genomic changes

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151711

Comparative development of fiber in wild and cultivated cotton

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151711

Genome evolution in polyploids

25 August 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151711

25 August 2018

12 December 2020

An anchored framework BAC map of mouse chromosome 11 assembled using multiplex oligonucleotide hybridization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151711

Dispersed repetitive DNA has spread to new genomes since polyploid formation in cotton

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151711

Polyploid formation created unique avenues for response to selection in Gossypium (cotton).

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151711

High Throughput Fingerprint Analysis of Large-Insert Clones

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151711

A detailed RFLP map of cotton, Gossypium hirsutum x Gossypium barbadense: chromosome organization and evolution in a disomic polyploid genome

25 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2151711

Chromosome structural changes in diploid and tetraploid A genomes of Gossypium

25 August 2018

1 reference

12 December 2020

Chromosomal Assignment of RFLP Linkage Groups Harboring Important QTLs on an Intraspecific Cotton (Gossypium hirsutum L.) Joinmap

1 reference

12 December 2020

Fluorescent in situ hybridization of a bacterial artificial chromosome

1 reference

12 December 2020

Cotton genome mapping with new microsatellites from Acala ‘Maxxa’ BAC-ends

1 reference

12 December 2020

Wide-cross whole-genome radiation hybrid mapping of the cotton (Gossypium barbadense L.) genome

1 reference

12 December 2020

Physical mapping of the Rf1 fertility-restoring gene to a 100 kb region in cotton

1 reference

12 December 2020

Genetic mapping of a cross between Gossypium hirsutum (cotton) and the Hawaiian endemic, Gossypium tomentosum

1 reference

12 December 2020

Identifiers

DOI

10.1104/PP.107.107672

1 reference

27 May 2018

PMC publication ID

2151711

0 references

1 reference

27 May 2018