RNA-directed DNA methylation involves co-transcriptional small-RNA-guided slicing of polymerase V transcripts in Arabidopsis. (Q48146856)

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13 March 2020

title

RNA-directed DNA methylation involves co-transcriptional small-RNA-guided slicing of polymerase V transcripts in Arabidopsis (English)

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13 March 2020

0 references

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13 March 2020

Martin Groth

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13 March 2020

Zhenhui Zhong

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Zonghua Wang

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13 March 2020

Jixian Zhai

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13 March 2020

Steven E. Jacobsen

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Joanne Chory

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13 March 2020

author name string

Wanlu Liu

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13 March 2020

Jonathan Hetzel

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Suhua Feng

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13 March 2020

Javier Gallego-Bartolome

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13 March 2020

Hsuan Yu Kuo

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publication date

29 January 2018

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13 March 2020

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volume

4

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issue

3

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13 March 2020

page(s)

181-188

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The human initiator is a distinct and abundant element that is precisely positioned in focused core promoters

13 March 2020

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Long non-coding RNA produced by RNA polymerase V determines boundaries of heterochromatin.

26 August 2018

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Identification of Pol IV and RDR2-dependent precursors of 24 nt siRNAs guiding de novo DNA methylation in Arabidopsis

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Domains rearranged methyltransferase3 controls DNA methylation and regulates RNA polymerase V transcript abundance in Arabidopsis

26 August 2018

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SNF2 chromatin remodeler-family proteins FRG1 and -2 are required for RNA-directed DNA methylation

26 August 2018

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SUVR2 is involved in transcriptional gene silencing by associating with SNF2-related chromatin-remodeling proteins in Arabidopsis

26 August 2018

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Detection of Pol IV/RDR2-dependent transcripts at the genomic scale in Arabidopsis reveals features and regulation of siRNA biogenesis

26 August 2018

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Molecular Mechanism of Action of Plant DRM De Novo DNA Methyltransferases

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26 August 2018

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SRA- and SET-domain-containing proteins link RNA polymerase V occupancy to DNA methylation

26 August 2018

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The Arabidopsis nucleosome remodeler DDM1 allows DNA methyltransferases to access H1-containing heterochromatin

26 August 2018

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Comprehensive analysis of silencing mutants reveals complex regulation of the Arabidopsis methylome.

26 August 2018

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In vitro transcription activities of Pol IV, Pol V, and RDR2 reveal coupling of Pol IV and RDR2 for dsRNA synthesis in plant RNA silencing

26 August 2018

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DDR complex facilitates global association of RNA polymerase V to promoters and evolutionarily young transposons

26 August 2018

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INVOLVED IN DE NOVO 2-containing complex involved in RNA-directed DNA methylation in Arabidopsis

26 August 2018

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IDN2 and its paralogs form a complex required for RNA-directed DNA methylation

26 August 2018

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AGO6 functions in RNA-mediated transcriptional gene silencing in shoot and root meristems in Arabidopsis thaliana

26 August 2018

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Independent Chromatin Binding of ARGONAUTE4 and SPT5L/KTF1 Mediates Transcriptional Gene Silencing

26 August 2018

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Deep sequencing of small RNAs specifically associated with Arabidopsis AGO1 and AGO4 uncovers new AGO functions

26 August 2018

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Identification of genes required for de novo DNA methylation in Arabidopsis

26 August 2018

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26 August 2018

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The Arabidopsis RNA-directed DNA methylation argonautes functionally diverge based on their expression and interaction with target loci

26 August 2018

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26 August 2018

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26 August 2018

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26 August 2018

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RNA-directed DNA methylation requires an AGO4-interacting member of the SPT5 elongation factor family.

26 August 2018

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26 August 2018

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Subunit compositions of the RNA-silencing enzymes Pol IV and Pol V reveal their origins as specialized forms of RNA polymerase II

26 August 2018

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An atypical RNA polymerase involved in RNA silencing shares small subunits with RNA polymerase II.

26 August 2018

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Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters

26 August 2018

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Noncoding transcription by RNA polymerase Pol IVb/Pol V mediates transcriptional silencing of overlapping and adjacent genes

26 August 2018

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26 August 2018

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Sorting of small RNAs into Arabidopsis argonaute complexes is directed by the 5' terminal nucleotide

26 August 2018

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Reiterated WG/GW motifs form functionally and evolutionarily conserved ARGONAUTE-binding platforms in RNAi-related components.

26 August 2018

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26 August 2018

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A slicer-mediated mechanism for repeat-associated siRNA 5' end formation in Drosophila

26 August 2018

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Distinct catalytic and non-catalytic roles of ARGONAUTE4 in RNA-directed DNA methylation

26 August 2018

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An ARGONAUTE4-containing nuclear processing center colocalized with Cajal bodies in Arabidopsis thaliana.

26 August 2018

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Reinforcement of silencing at transposons and highly repeated sequences requires the concerted action of two distinct RNA polymerases IV in Arabidopsis.

26 August 2018

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Biochemical specialization within Arabidopsis RNA silencing pathways

26 August 2018

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RNA polymerase IV directs silencing of endogenous DNA.

26 August 2018

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RITS acts in cis to promote RNA interference-mediated transcriptional and post-transcriptional silencing

26 August 2018

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26 August 2018

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The RNA polymerase II core promoter

26 August 2018

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ARGONAUTE4 control of locus-specific siRNA accumulation and DNA and histone methylation

26 August 2018

1 reference

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Purines are required at the 5' ends of newly initiated RNAs for optimal RNA polymerase III gene expression

26 August 2018

1 reference

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The nucleotide sequence of the initiation and termination sites for ribosomal rna transcription in x. laevis

26 August 2018

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RNA Elimination Machinery Targeting Meiotic mRNAs Promotes Facultative Heterochromatin Formation

26 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038/S41477-017-0100-Y

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/S41477-017-0100-Y

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29379150 AND SRC:MED&resulttype=core&format=json

13 March 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29379150 AND SRC:MED&resulttype=core&format=json

13 March 2020

PubMed publication ID

29379150

1 reference