Colonic transit time is related to bacterial metabolism and mucosal turnover in the gut. (Q46496889)

22 December 2017

title

Colonic transit time is related to bacterial metabolism and mucosal turnover in the gut. (English)

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22 December 2017

author

Thomas Sicheritz-Ponten

12

Thomas Sicheritz-Pontén

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Damian Plichta

Damian R Plichta

8

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Henrik M. Roager

Henrik M Roager

1

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Martin Iain Bahl

Martin I Bahl

3

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Henrik Vestergaard

Henrik Vestergaard

10

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Tine Rask Licht

Tine R Licht

18

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Torben Hansen

Torben Hansen

11

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Oluf Borbye Pedersen

Oluf Pedersen

14

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Lotte Lauritzen

Lotte Lauritzen

15

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author name string

Lea B S Hansen

2

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22 December 2017

Henrik L Frandsen

4

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22 December 2017

Vera Carvalho

5

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22 December 2017

Rikke J Gøbel

6

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22 December 2017

Marlene D Dalgaard

7

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22 December 2017

Morten H Sparholt

9

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22 December 2017

H Bjørn Nielsen

13

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22 December 2017

Mette Kristensen

16

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22 December 2017

Ramneek Gupta

17

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22 December 2017

language of work or name

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27 June 2016

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22 December 2017

published in

Nature Microbiology

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22 December 2017

volume

1

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22 December 2017

issue

9

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22 December 2017

page(s)

16093

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22 December 2017

Richness of human gut microbiome correlates with metabolic markers

cites work

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Diversity, stability and resilience of the human gut microbiota

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Stool consistency is strongly associated with gut microbiota richness and composition, enterotypes and bacterial growth rates

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Gut microbiota composition associated with stool consistency.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Regional gastrointestinal transit and pH studied in 215 healthy volunteers using the wireless motility capsule: influence of age, gender, study country and testing protocol.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Gut microbial activity, implications for health and disease: the potential role of metabolite analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Functional interactions between the gut microbiota and host metabolism

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Intestinal luminal nitrogen metabolism: role of the gut microbiota and consequences for the host.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Colonic bacterial metabolites and human health

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

The deleterious metabolic and genotoxic effects of the bacterial metabolite p-cresol on colonic epithelial cells.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

The gut microbiota, bacterial metabolites and colorectal cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Free Levels of Selected Organic Solutes and Cardiovascular Morbidity and Mortality in Hemodialysis Patients: Results from the Retained Organic Solutes and Clinical Outcomes (ROSCO) Investigators

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Urinary p-cresol is elevated in young French children with autism spectrum disorder: a replication study

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Population-level analysis of gut microbiome variation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Enterotypes of the human gut microbiome

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Microbial enterotypes, inferred by the prevotella-to-bacteroides ratio, remained stable during a 6-month randomized controlled diet intervention with the new nordic diet

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Systemic multicompartmental effects of the gut microbiome on mouse metabolic phenotypes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Metabolic fingerprint of dimethyl sulfone (DMSO2) in microbial-mammalian co-metabolism

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Use of oral antimicrobials decreases serum enterolactone concentration

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Determination of 7-methylguanine, N2,N2-dimethylguanosine, and pseudouridine in ultrafiltrated serum of healthy adults by high-performance liquid chromatography

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

7-methylguanine and other minor urinary purines: Values for normal subjects from Israel, Gaza, and Kenya, and for patients with cancer of various organs or cirrhosis of the liver

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

The two mucus layers of colon are organized by the MUC2 mucin, whereas the outer layer is a legislator of host-microbial interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Gut-Microbiota-Metabolite Axis in Early Renal Function Decline

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Methane, a gas produced by enteric bacteria, slows intestinal transit and augments small intestinal contractile activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Short-chain fatty acids regulate the enteric neurons and control gastrointestinal motility in rats

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

How well does stool form reflect colonic transit?

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Association between Faecalibacterium prausnitzii and dietary fibre in colonic fermentation in healthy human subjects.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Metabolic fate of polyphenols in the human superorganism

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

In vitro bioconversion of polyphenols from black tea and red wine/grape juice by human intestinal microbiota displays strong interindividual variability.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

In vivo and in vitro metabolism of trans-resveratrol by human gut microbiota.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Decreased colonic mucus in rats with loperamide-induced constipation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Resistant starch attenuates colonic DNA damage induced by higher dietary protein in rats

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Dietary fructo-oligosaccharides and inulin decrease resistance of rats to salmonella: protective role of calcium

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Effects of an elemental diet, inert bulk and different types of dietary fibre on the response of the intestinal epithelium to refeeding in the rat and relationship to plasma gastrin, enteroglucagon, and PYY concentrations

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Increasing butyrate concentration in the distal colon by accelerating intestinal transit

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Quantitative Imaging of Gut Microbiota Spatial Organization

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Risk of developing colorectal cancer and benign colorectal neoplasm in patients with chronic constipation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Evaluation of relative LC/MS response of metabolites to parent drug in LC/nanospray ionization mass spectrometry: potential implications in MIST assessment

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Association of constipation and fecal incontinence with attention-deficit/hyperactivity disorder

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Constipation in children with autism and autistic spectrum disorder

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Dose-response effect of Bifidobacterium lactis HN019 on whole gut transit time and functional gastrointestinal symptoms in adults

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Choice of bacterial DNA extraction method from fecal material influences community structure as evaluated by metagenomic analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

UPARSE: highly accurate OTU sequences from microbial amplicon reads

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

QIIME allows analysis of high-throughput community sequencing data

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Search and clustering orders of magnitude faster than BLAST

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

PyNAST: a flexible tool for aligning sequences to a template alignment

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

FastTree: computing large minimum evolution trees with profiles instead of a distance matrix

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Combination of injection volume calibration by creatinine and MS signals' normalization to overcome urine variability in LC-MS-based metabolomics studies.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

XCMS: processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

HMDB 3.0--The Human Metabolome Database in 2013

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

APE: Analyses of Phylogenetics and Evolution in R language

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Two Randomized Cross-Over Trials Assessing the Impact of Dietary Gluten or Wholegrain on the Gut Microbiome and Host Metabolic Health

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

Global metabolic profiling procedures for urine using UPLC–MS

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/NMICROBIOL.2016.93

ppcor: An R Package for a Fast Calculation to Semi-partial Correlation Coefficients

21 January 2018

1 reference

12 December 2020

Effects of indigestible dietary bulk and short chain fatty acids on the tissue weight and epithelial cell proliferation rate of the digestive tract in rats

1 reference

12 December 2020

Molecular microbial diversity of an anaerobic digestor as determined by small-subunit rDNA sequence analysis

1 reference

12 December 2020

Colonic transit time in long-term dialysis patients

1 reference

12 December 2020

Polyamines and Gut Mucosal Homeostasis.

1 reference

12 December 2020

The effect of meat protein and dietary fiber on colonic function and metabolism II. Bacterial metabolites in feces and urine

1 reference

12 December 2020

Polyphenols: food sources and bioavailability

1 reference

12 December 2020

Whole-body degradation rates of transfer-, ribosomal-, and messenger ribonucleic acids and resting metabolic rate in 3- to 18-year-old humans

1 reference

12 December 2020

Influence of retention time on degradation of pancreatic enzymes by human colonic bacteria grown in a 3-stage continuous culture system

1 reference

12 December 2020

Accuracy in assessment of colonic transit time with particles: how many markers should be used?

1 reference

12 December 2020

10.1038/NMICROBIOL.2016.93

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DOI

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22 December 2017

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24 November 2022

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22 December 2017