A stable core gut microbiota across fresh- to saltwater transition for farmed Atlantic salmon. (Q46269190)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29101198 AND SRC:MED&resulttype=core&format=json

8 April 2020

title

Stable Core Gut Microbiota across the Freshwater-to-Saltwater Transition for Farmed Atlantic Salmon (English)

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8 April 2020

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3

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8 April 2020

author name string

Knut Rudi

1

1 reference

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8 April 2020

Inga Leena Angell

2

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8 April 2020

Jon Olav Vik

4

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8 April 2020

Simen Rød Sandve

5

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8 April 2020

Lars-Gustav Snipen

6

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8 April 2020

language of work or name

English

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publication date

2 January 2018

1 reference

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Applied and Environmental Microbiology

8 April 2020

published in

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8 April 2020

volume

84

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8 April 2020

issue

2

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Fish intestinal microbiome: diversity and symbiosis unravelled by metagenomics.

8 April 2020

cites work

1 reference

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Environmental and physiological factors shape the gut microbiota of Atlantic salmon parr (Salmo salar L.).

26 August 2018

1 reference

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Plasticity in growth of farmed and wild Atlantic salmon: is the increased growth rate of farmed salmon caused by evolutionary adaptations to the commercial diet?

26 August 2018

1 reference

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A high-resolution map of the gut microbiota in Atlantic salmon (Salmo salar): A basis for comparative gut microbial research

26 August 2018

1 reference

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Transition from infant- to adult-like gut microbiota.

26 August 2018

1 reference

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Transition from freshwater to seawater reshapes the skin-associated microbiota of Atlantic salmon

26 August 2018

1 reference

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Atlantic Salmon (Salmo salar L.) Gastrointestinal Microbial Community Dynamics in Relation to Digesta Properties and Diet

26 August 2018

1 reference

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The biogeography of the atlantic salmon (Salmo salar) gut microbiome

26 August 2018

1 reference

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Mucin glycan foraging in the human gut microbiome.

26 August 2018

1 reference

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Evaluation of the Performances of Ribosomal Database Project (RDP) Classifier for Taxonomic Assignment of 16S rRNA Metabarcoding Sequences Generated from Illumina-Solexa NGS.

26 August 2018

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Diversity and geochemical structuring of bacterial communities along a salinity gradient in a carbonate aquifer subject to seawater intrusion

26 August 2018

1 reference

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Pyrosequencing-based characterization of gastrointestinal bacteria of Atlantic salmon (Salmo salar L.) within a commercial mariculture system.

26 August 2018

1 reference

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Dietary synbiotic application modulates Atlantic salmon (Salmo salar) intestinal microbial communities and intestinal immunity

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5752857

UPARSE: highly accurate OTU sequences from microbial amplicon reads

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5752857

Dietary soybean protein concentrate-induced intestinal disorder in marine farmed Atlantic salmon, Salmo salar is associated with alterations in gut microbiota.

26 August 2018

1 reference

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High fat diet-induced gut microbiota exacerbates inflammation and obesity in mice via the TLR4 signaling pathway

26 August 2018

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Characterization of the probiotic strain Vagococcus fluvialis in the protection of European sea bass (Dicentrarchus labrax) against vibriosis by Vibrio anguillarum

26 August 2018

1 reference

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Freshwater Perkinsea and marine-freshwater colonizations revealed by pyrosequencing and phylogeny of environmental rDNA.

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5752857

Infrequent marine-freshwater transitions in the microbial world.

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5752857

Helkesimastix marina n. sp. (Cercozoa: Sainouroidea superfam. n.) a gliding zooflagellate of novel ultrastructure and unusual ciliary behaviour

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5752857

Group-specific primer and probe sets to detect methanogenic communities using quantitative real-time polymerase chain reaction

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5752857

BLAT—The BLAST-Like Alignment Tool

26 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5752857

Molecular Analysis of Microbiota Along the Digestive Tract of Juvenile Atlantic Salmon (Salmo salar L.)

26 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/29101198

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1128/AEM.01974-17

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29101198 AND SRC:MED&resulttype=core&format=json

8 April 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:29101198 AND SRC:MED&resulttype=core&format=json

8 April 2020

PubMed publication ID

29101198

1 reference