Ecological and evolutionary factors underlying global and local assembly of denitrifier communities (Q44575486)

4 December 2017

title

Ecological and evolutionary factors underlying global and local assembly of denitrifier communities (English)

1 reference

4 December 2017

Sara Hallin

2

0 references

author name string

Christopher M Jones

series ordinal

1

1 reference

4 December 2017

publication date

21 January 2010

1 reference

4 December 2017

1 reference

4 December 2017

volume

4

1 reference

4 December 2017

issue

5

1 reference

4 December 2017

page(s)

633-641

1 reference

maintained by WikiProject

4 December 2017

1 reference

ProtTest: selection of best-fit models of protein evolution

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

Nitrite reductase genes (nirK and nirS) as functional markers to investigate diversity of denitrifying bacteria in pacific northwest marine sediment communities

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

Phylogenetic structure of Floridian plant communities depends on taxonomic and spatial scale

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

The merging of community ecology and phylogenetic biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

Profile hidden Markov models

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

Genomic analysis reveals widespread occurrence of new classes of copper nitrite reductases

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

Activity and composition of the denitrifying bacterial community respond differently to long-term fertilization

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

The diversity and biogeography of soil bacterial communities

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

Phylogenetic beta diversity: linking ecological and evolutionary processes across space in time.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

Metabolic profiles and genetic diversity of denitrifying communities in activated sludge after addition of methanol or ethanol

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

Phylogenetic clustering and overdispersion in bacterial communities

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

Phylogenetic analysis of nitrite, nitric oxide, and nitrous oxide respiratory enzymes reveal a complex evolutionary history for denitrification.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

MAFFT version 5: improvement in accuracy of multiple sequence alignment

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

Disentangling niche and neutral influences on community assembly: assessing the performance of community phylogenetic structure tests

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

UniFrac: a new phylogenetic method for comparing microbial communities

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

Quantitative and qualitative beta diversity measures lead to different insights into factors that structure microbial communities

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

Global patterns in bacterial diversity

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

ARB: a software environment for sequence data

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

The rate and pattern of cladogenesis in microbes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

Analysis of nitrite reductase (nirK and nirS) genes and cultivation reveal depauperate community of denitrifying bacteria in the Black Sea suboxic zone

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

APE: Analyses of Phylogenetics and Evolution in R language

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

jModelTest: phylogenetic model averaging

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

New inferences from tree shape: numbers of missing taxa and population growth rates

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

Testing macro-evolutionary models using incomplete molecular phylogenies

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

The general stochastic model of nucleotide substitution

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

A Nonparametric Approach to Estimating Divergence Times in the Absence of Rate Constancy

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

Denitrifier community composition along a nitrate and salinity gradient in a coastal aquifer

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

CAMERA: a community resource for metagenomics

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

Genetic and functional variation in denitrifier populations along a short-term restoration chronosequence

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

Phylocom: software for the analysis of phylogenetic community structure and trait evolution

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

Metric and Euclidean properties of dissimilarity coefficients

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

Development of PCR primer systems for amplification of nitrite reductase genes (nirK and nirS) to detect denitrifying bacteria in environmental samples

21 January 2018

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

inferred from DOI database lookup

7 January 2021

based on heuristic

Baltic Sea cyanobacterial bloom contains denitrification and nitrification genes, but has negligible denitrification activity

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

inferred from DOI database lookup

7 January 2021

based on heuristic

Exploring the Phylogenetic Structure of Ecological Communities: An Example for Rain Forest Trees

1 reference

https://api.crossref.org/works/10.1038/ISMEJ.2009.152

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/ISMEJ.2009.152

1 reference

4 December 2017

1 reference