Conformational variants of duplex DNA correlated with cytosine-rich chromosomal fragile sites. (Q43167080)

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19 January 2020

title

Conformational variants of duplex DNA correlated with cytosine-rich chromosomal fragile sites (English)

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19 January 2020

2

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19 January 2020

author name string

Albert G Tsai

1

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19 January 2020

Ma'mon M Hatmal

3

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19 January 2020

Sabrina I Houston

4

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19 January 2020

Nicholas V Hud

5

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19 January 2020

Ian S Haworth

6

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19 January 2020

Michael R Lieber

7

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19 January 2020

language of work or name

English

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publication date

23 December 2008

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19 January 2020

number of pages

8

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Journal of Biological Chemistry

inferred from page(s)

published in

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19 January 2020

volume

284

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19 January 2020

issue

11

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19 January 2020

page(s)

7157-7164

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DNA conformations and their sequence preferences.

19 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652318

Detection of DNA structural motifs in functional genomic elements.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652318

Identification of two distinct MYC breakpoint clusters and their association with various IGH breakpoint regions in the t(8;14) translocations in sporadic Burkitt-lymphoma.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652318

The structure-specific nicking of small heteroduplexes by the RAG complex: implications for lymphoid chromosomal translocations

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652318

DNA structures, repeat expansions and human hereditary disorders.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652318

Double-strand break formation by the RAG complex at the bcl-2 major breakpoint region and at other non-B DNA structures in vitro

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652318

The Artemis:DNA-PKcs endonuclease cleaves DNA loops, flaps, and gaps

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652318

How sequence defines structure: a crystallographic map of DNA structure and conformation.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652318

PDB2PQR: an automated pipeline for the setup of Poisson-Boltzmann electrostatics calculations

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652318

A non-B-DNA structure at the Bcl-2 major breakpoint region is cleaved by the RAG complex

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652318

Molecular basis of mantle cell lymphoma

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652318

Translocation and gross deletion breakpoints in human inherited disease and cancer I: Nucleotide composition and recombination-associated motifs

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652318

A unified model for the origin of DNA sequence-directed curvature.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652318

R-loops at immunoglobulin class switch regions in the chromosomes of stimulated B cells

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652318

Electrostatics of nanosystems: application to microtubules and the ribosome

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652318

A crystallographic map of the transition from B-DNA to A-DNA.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652318

A-form conformational motifs in ligand-bound DNA structures

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652318

The structure of a stable intermediate in the A left-right-arrow B DNA helix transition

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652318

Crystal structures of A-DNA duplexes

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652318

VMD: visual molecular dynamics

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652318

High sensitivity mapping of methylated cytosines

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652318

The structure of cruciforms in supercoiled DNA: probing the single-stranded character of nucleotide bases with bisulphite.

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652318

The definition of generalized helicoidal parameters and of axis curvature for irregular nucleic acids

25 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2652318

Particle mesh Ewald: An N⋅log(N) method for Ewald sums in large systems

25 May 2018

1 reference

Crossref

https://api.crossref.org/works/10.1074/JBC.M806866200

Role of bisulfite in the deamination and the hydrogen isotope exchange of cytidylic acid

21 January 2018

1 reference

12 December 2020

Deamination of cytosine derivatives by bisulfite. Mechanism of the reaction

1 reference

12 December 2020

A bisulfite method of 5-methylcytosine mapping that minimizes template degradation

1 reference

12 December 2020

High base pair opening rates in tracts of GC base pairs

1 reference

12 December 2020

Identifiers

DOI

10.1074/JBC.M806866200

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19106104 AND SRC:MED&resulttype=core&format=json

19 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19106104 AND SRC:MED&resulttype=core&format=json

19 January 2020

PubMed publication ID

19106104

1 reference