Impact of long-term diesel contamination on soil microbial community structure (Q42953244)

11 November 2017

Impact of long-term diesel contamination on soil microbial community structure (English)

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11 November 2017

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11 November 2017

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11 November 2017

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11 November 2017

3

Jose A Morillo

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11 November 2017

Nora B Sutton

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11 November 2017

Farai Maphosa

series ordinal

2

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11 November 2017

Alette A M Langenhoff

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11 November 2017

Huub H M Rijnaarts

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11 November 2017

language of work or name

English

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publication date

9 November 2012

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Applied and Environmental Microbiology

11 November 2017

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11 November 2017

79

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11 November 2017

2

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11 November 2017

619-630

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Metagenomic analysis of the bioremediation of diesel-contaminated Canadian high arctic soils

11 November 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Barcoded primers used in multiplex amplicon pyrosequencing bias amplification

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Comparative Analysis of Bacterial Communities in a Potato Field as Determined by Pyrosequencing

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Mangrove bacterial diversity and the impact of oil contamination revealed by pyrosequencing: bacterial proxies for oil pollution

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Pyrosequencing-based assessment of bacterial community structure along different management types in German forest and grassland soils

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Examining the global distribution of dominant archaeal populations in soil

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Bacterial community changes during bioremediation of aliphatic hydrocarbon-contaminated soil.

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Bacterial communities reflect the spatial variation in pollutant levels in Brazilian mangrove sediment.

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Mature fine tailings from oil sands processing harbour diverse methanogenic communities

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

QIIME allows analysis of high-throughput community sequencing data

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Comparison of archaeal and bacterial community structures in heavily oil-contaminated and pristine soils

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Microarray and real-time PCR analyses of the responses of high-arctic soil bacteria to hydrocarbon pollution and bioremediation treatments

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Pyrosequencing-based assessment of soil pH as a predictor of soil bacterial community structure at the continental scale

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Changes in soil Acidobacteria communities after 2,4,6-trinitrotoluene contamination

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

FastTree: computing large minimum evolution trees with profiles instead of a distance matrix

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Bioremediation potential of a tropical soil contaminated with a mixture of crude oil and production water.

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

A comprehensive survey of soil acidobacterial diversity using pyrosequencing and clone library analyses

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Depth-resolved quantification of anaerobic toluene degraders and aquifer microbial community patterns in distinct redox zones of a tar oil contaminant plume.

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Monitoring of microbial diversity and activity during bioremediation of crude oil-contaminated soil with different treatments

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Pyrosequencing enumerates and contrasts soil microbial diversity

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Effects of heavy fuel oil on the bacterial community structure of a pristine microbial mat

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Microbe-aliphatic hydrocarbon interactions in soil: implications for biodegradation and bioremediation.

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

The microbial community structure in petroleum-contaminated sediments corresponds to geophysical signatures

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Alkane hydroxylases involved in microbial alkane degradation

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Bacterial diversity in the active stage of a bioremediation system for mineral oil hydrocarbon-contaminated soils

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

NAST: a multiple sequence alignment server for comparative analysis of 16S rRNA genes

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Hydrocarbon contamination changes the bacterial diversity of soil from around Scott Base, Antarctica

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Bacterial community dynamics and polycyclic aromatic hydrocarbon degradation during bioremediation of heavily creosote-contaminated soil.

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Activity and diversity of methanogens in a petroleum hydrocarbon-contaminated aquifer

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Bacterial succession in a petroleum land treatment unit

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Soil type is the primary determinant of the composition of the total and active bacterial communities in arable soils

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Microbial communities in different soil types do not converge after diesel contamination

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Bacteria and Archaea physically associated with Gulf of Mexico gas hydrates

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Microbial degradation of hydrocarbons in the environment

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Analysis of the microbial gene landscape and transcriptome for aromatic pollutants and alkane degradation using a novel internally calibrated microarray system

26 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Functional gene abundances (nahAc, alkB, xylE) in the assessment of the efficacy of bioremediation

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Using real-time PCR to assess changes in the hydrocarbon-degrading microbial community in Antarctic soil during bioremediation.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Diversity of biosurfactant producing microorganisms isolated from soils contaminated with diesel oil.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Physiological and molecular characterization of a microbial community established in unsaturated, petroleum-contaminated soil

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Response of bacterial community during bioremediation of an oil-polluted soil.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Methane formation from long-chain alkanes by anaerobic microorganisms

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Effects of oxygen, nitrogen, and temperature on gasoline biodegradation in soil

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3553749

Polyphasic microbial community analysis of petroleum hydrocarbon-contaminated soils from two northern Canadian communities

16 August 2018

1 reference

12 December 2020

Microbial activity and community composition during bioremediation of diesel-oil-contaminated soil: effects of hydrocarbon concentration, fertilizers, and incubation time

1 reference

12 December 2020

A new method for the detection of alkane-monooxygenase homologous genes (alkB) in soils based on PCR-hybridization

1 reference

12 December 2020

Biodegradation of semi- and non-volatile petroleum hydrocarbons in aged, contaminated soils from a sub-Arctic site: laboratory pilot-scale experiments at site temperatures

1 reference

12 December 2020

Effect of hydrocarbon pollution on the microbial properties of a sandy and a clay soil

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12 December 2020

Identifiers

DOI

10.1128/AEM.02747-12

1 reference

release_iyo7g54uszh3zgekzjia7gamxy

11 November 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/iyo7g54uszh3zgekzjia7gamxy

24 November 2022

mapped directly with Wikidata item

1 reference

11 November 2017

PubMed publication ID

23144139

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