Interactions between the RepB initiator protein of plasmid pMV158 and two distant DNA regions within the origin of replication. (Q42854097)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17267412 AND SRC:MED&resulttype=core&format=json

25 December 2019

title

Interactions between the RepB initiator protein of plasmid pMV158 and two distant DNA regions within the origin of replication (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17267412 AND SRC:MED&resulttype=core&format=json

25 December 2019

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17267412 AND SRC:MED&resulttype=core&format=json

25 December 2019

José A Ruiz-Masó

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17267412 AND SRC:MED&resulttype=core&format=json

25 December 2019

author name string

Rudi Lurz

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17267412 AND SRC:MED&resulttype=core&format=json

25 December 2019

Manuel Espinosa

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17267412 AND SRC:MED&resulttype=core&format=json

25 December 2019

language of work or name

English

0 references

publication date

31 January 2007

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17267412 AND SRC:MED&resulttype=core&format=json

25 December 2019

published in

Nucleic Acids Research

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17267412 AND SRC:MED&resulttype=core&format=json

25 December 2019

volume

35

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17267412 AND SRC:MED&resulttype=core&format=json

25 December 2019

issue

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17267412 AND SRC:MED&resulttype=core&format=json

25 December 2019

page(s)

1230-1244

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17267412 AND SRC:MED&resulttype=core&format=json

Mechanism of DNA translocation in a replicative hexameric helicase

25 December 2019

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851628

Modeling the Lac repressor-operator assembly: the influence of DNA looping on Lac repressor conformation

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851628

Role of RepB in the replication of plasmid pJB01 isolated from Enterococcus faecium JC1.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851628

Plasmid rolling-circle replication: highlights of two decades of research

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851628

IHF and HU: flexible architects of bent DNA.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851628

The nuclease domain of adeno-associated virus rep coordinates replication initiation using two distinct DNA recognition interfaces

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851628

DNA-protein interactions during the initiation and termination of plasmid pT181 rolling-circle replication

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851628

Biochemical characterization of the Staphylococcus aureus PcrA helicase and its role in plasmid rolling circle replication

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851628

Non-independence of Mnt repressor-operator interaction determined by a new quantitative multiple fluorescence relative affinity (QuMFRA) assay.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851628

Plasmid rolling-circle replication: recent developments

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851628

Replication and control of circular bacterial plasmids.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851628

Why is the initiation nick site of an AT-rich rolling circle plasmid at the tip of a GC-rich cruciform?

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851628

In vitro recognition of the replication origin of pLS1 and of plasmids of the pLS1 family by the RepB initiator protein

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851628

Localisation of DNA-protein contact points by DMS resistance of complexes resolved in gel retardation assays

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851628

Replication-specific conversion of the Staphylococcus aureus pT181 initiator protein from an active homodimer to an inactive heterodimer

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851628

Active site of the replication protein of the rolling circle plasmid pC194.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851628

Determination of sequence specificity between a plasmid replication initiator protein and the origin of replication

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851628

The locus of sequence-directed and protein-induced DNA bending

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851628

57 Sequencing end-labeled DNA with base-specific chemical cleavages

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851628

Sequence-specific interaction between the replication initiator protein of plasmid pT181 and its origin of replication

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851628

Empirical estimation of protein-induced DNA bending angles: applications to lambda site-specific recombination complexes

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851628

Identification of the origin and direction of replication of the broad-host-range plasmid pLS1.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851628

Identification and analysis of genes for tetracycline resistance and replication functions in the broad-host-range plasmid pLS1.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851628

In vitro studies of the initiation of staphylococcal plasmid replication. Specificity of RepD for its origin (oriD) and characterization of the Rep-ori tyrosyl ester intermediate

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851628

Determination of binding constants for cooperative site-specific protein-DNA interactions using the gel mobility-shift assay

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851628

10 Footprinting protein-DNA complexes in Vivo

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851628

Uncoupling of the DNA topoisomerase and replication activities of an initiator protein.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851628

Multiple roles for DNA polymerase I in establishment and replication of the promiscuous plasmid pLS1.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851628

The CSB protein actively wraps DNA.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851628

Isomerization and apparent DNA bending by pi, the replication protein of plasmid R6K.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851628

Role of the double-strand origin cruciform in pT181 replication.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851628

Sequence requirements for the termination of rolling-circle replication of plasmid pT181.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851628

In vivo definition of the functional origin of replication (ori( )) of the promiscuous plasmid pLS1.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851628

Inhibition of transcription initiation by lac repressor.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1851628

Specific Nicking-Closing Activity of the Initiator of Replication Protein RepB of Plasmid pMV158 on Supercoiled or Single-stranded DNA

16 August 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093/NAR/GKL1099

21 January 2018

1 reference

12 December 2020

Bending of DNA by gene-regulatory proteins: construction and use of a DNA bending vector

1 reference

12 December 2020

Specificity of RepC protein in plasmid pT181 DNA replication

1 reference

12 December 2020

Initiation of replication of plasmid pLS1

1 reference

12 December 2020

Plasmid pLS1-encoded RepA protein regulates transcription from repAB promoter by binding to a DNA sequence containing a 13-base pair symmetric element

1 reference

12 December 2020

Contrasting lifestyles of rolling-circle phages and plasmids

1 reference

12 December 2020

Structural features of the initiator of replication protein RepB encoded by the promiscuous plasmid pMV158

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKL1099

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17267412 AND SRC:MED&resulttype=core&format=json

25 December 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17267412 AND SRC:MED&resulttype=core&format=json

25 December 2019

PubMed publication ID

17267412

1 reference