An essential role of KREPB4 in RNA editing and structural integrity of the editosome in Trypanosoma brucei. (Q42851304)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17369311 AND SRC:MED&resulttype=core&format=json

27 December 2019

title

An essential role of KREPB4 in RNA editing and structural integrity of the editosome in Trypanosoma brucei (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17369311 AND SRC:MED&resulttype=core&format=json

RNA editing complex protein MP46

27 December 2019

main subject

Trypanosoma brucei

0 references

1 reference

6 February 2019

1 reference

6 February 2019

RNA editing complex protein MP46, putative

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RNA editing complex protein MP46, putative

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RNA editing complex protein MP46

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RNA editing complex protein MP46

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author

Achim Schnaufer

4

1 reference

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27 December 2019

author name string

Vinod Kumar Babbarwal

1

1 reference

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27 December 2019

Michele Fleck

2

1 reference

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27 December 2019

Nancy Lewis Ernst

3

1 reference

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27 December 2019

Kenneth Stuart

5

1 reference

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27 December 2019

language of work or name

English

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publication date

16 March 2007

1 reference

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27 December 2019

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27 December 2019

volume

13

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27 December 2019

issue

5

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27 December 2019

page(s)

737-744

1 reference

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Reconstitution of full-round uridine-deletion RNA editing with three recombinant proteins

27 December 2019

cites work

1 reference

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Compositionally and functionally distinct editosomes in Trypanosoma brucei

27 May 2018

1 reference

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KREPA4, an RNA binding protein essential for editosome integrity and survival of Trypanosoma brucei

27 May 2018

1 reference

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An essential RNase III insertion editing endonuclease in Trypanosoma brucei.

27 May 2018

1 reference

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TbMP42, a protein component of the RNA editing complex in African trypanosomes, has endo-exoribonuclease activity

27 May 2018

1 reference

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Complex management: RNA editing in trypanosomes

27 May 2018

1 reference

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Reconstitution of uridine-deletion precleaved RNA editing with two recombinant enzymes.

27 May 2018

1 reference

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RNA interference analyses suggest a transcript-specific regulatory role for mitochondrial RNA-binding proteins MRP1 and MRP2 in RNA editing and other RNA processing in Trypanosoma brucei

27 May 2018

1 reference

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Mitochondrial proteins and complexes in Leishmania and Trypanosoma involved in U-insertion/deletion RNA editing

27 May 2018

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Comparative analysis of editosome proteins in trypanosomatids

27 May 2018

1 reference

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Trypanosoma brucei RNA editing complex: band II is structurally critical and maintains band V ligase, which is nonessential

27 May 2018

1 reference

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27 May 2018

A tale of two TUTases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

TbMP44 is essential for RNA editing and structural integrity of the editosome in Trypanosoma brucei

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

Identification of novel components of Trypanosoma brucei editosomes

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

RBP16 is a multifunctional gene regulatory protein involved in editing and stabilization of specific mitochondrial mRNAs in Trypanosoma brucei

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

Assumption-free analysis of quantitative real-time polymerase chain reaction (PCR) data

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

Isolation of a U-insertion/deletion editing complex from Leishmania tarentolae mitochondria

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

A 100-kD complex of two RNA-binding proteins from mitochondria of Leishmania tarentolae catalyzes RNA annealing and interacts with several RNA editing components

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

Role of uridylate-specific exoribonuclease activity in Trypanosoma brucei RNA editing

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

Assembly and function of the RNA editing complex in Trypanosoma brucei requires band III protein

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

TbMP81 is required for RNA editing in Trypanosoma brucei

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

Editing machines: the complexities of trypanosome RNA editing

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

Composition of the editing complex of Trypanosoma brucei

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

Mechanism of the gBP21-mediated RNA/RNA annealing reaction: matchmaking and charge reduction

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

Roles for ligases in the RNA editing complex of Trypanosoma brucei: band IV is needed for U-deletion and RNA repair.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

A new mathematical model for relative quantification in real-time RT-PCR

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

Identification of candidate mitochondrial RNA editing ligases from Trypanosoma brucei

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

The two RNA ligases of the Trypanosoma brucei RNA editing complex: cloning the essential band IV gene and identifying the band V gene

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

Trypanosome RNA editing: simple guide RNA features enhance U deletion 100-fold.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

Association of two novel proteins, TbMP52 and TbMP48, with the Trypanosoma brucei RNA editing complex

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

Uridylate addition and RNA ligation contribute to the specificity of kinetoplastid insertion RNA editing

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

A tightly regulated inducible expression system for conditional gene knock-outs and dominant-negative genetics in Trypanosoma brucei

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

Trypanosoma brucei RBP16 is a mitochondrial Y-box family protein with guide RNA binding activity

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

Purification of a functional enzymatic editing complex from Trypanosoma brucei mitochondria

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

RNA editing in kinetoplastid protozoa

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

Structural insight into the mechanism of double-stranded RNA processing by ribonuclease III.

27 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

A deletion site editing endonuclease in Trypanosoma brucei.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

Structural basis for UTP specificity of RNA editing TUTases from Trypanosoma brucei

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

Separate insertion and deletion subcomplexes of the Trypanosoma brucei RNA editing complex.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

Mass spectrometric analysis of the editosome and other multiprotein complexes in Trypanosoma brucei.

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

TbMP57 is a 3' terminal uridylyl transferase (TUTase) of the Trypanosoma brucei editosome

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

Is the Trypanosoma brucei REL1 RNA ligase specific for U-deletion RNA editing, and is the REL2 RNA ligase specific for U-insertion editing?

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

Trypanosome mitochondrial 3' terminal uridylyl transferase (TUTase): the key enzyme in U-insertion/deletion RNA editing

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

An RNA ligase essential for RNA editing and survival of the bloodstream form of Trypanosoma brucei

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

Trypanosoma brucei TBRGG1, a mitochondrial oligo(U)-binding protein that co-localizes with an in vitro RNA editing activity

16 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1852822

Inhibition of Trypanosoma brucei gene expression by RNA interference using an integratable vector with opposing T7 promoters

16 August 2018

1 reference

12 December 2020

RNA editing-associated protein 1 is an RNA binding protein with specificity for preedited mRNA

1 reference

12 December 2020

Crystal structures of T. brucei MRP1/MRP2 guide-RNA binding complex reveal RNA matchmaking mechanism

1 reference

12 December 2020

Kinetoplastid RNA editing ligases: complex association, characterization, and substrate requirements

1 reference

12 December 2020

RNA ligase and its involvement in guide RNA/mRNA chimera formation. Evidence for a cleavage-ligation mechanism of Trypanosoma brucei mRNA editing

1 reference

12 December 2020

Identifiers

DOI

10.1261/RNA.327707

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17369311 AND SRC:MED&resulttype=core&format=json

release_5lvbsxz3z5gmfjqrtwuubujl5e

27 December 2019

Fatcat ID

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Fatcat

https://api.fatcat.wiki/v0/release/5lvbsxz3z5gmfjqrtwuubujl5e

24 November 2022

mapped directly with Wikidata item

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17369311 AND SRC:MED&resulttype=core&format=json

27 December 2019

PubMed publication ID

17369311

1 reference