Estimation of the number of alpha-helical and beta-strand segments in proteins using circular dichroism spectroscopy (Q42084653)

16 October 2017

Estimation of the number of alpha-helical and beta-strand segments in proteins using circular dichroism spectroscopy (English)

1 reference

16 October 2017

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N Sreerama

1

1 reference

16 October 2017

S Y Venyaminov

series ordinal

2

1 reference

16 October 2017

R W Woody

series ordinal

3

1 reference

16 October 2017

1 February 1999

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16 October 2017

1 reference

16 October 2017

8

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16 October 2017

2

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16 October 2017

370-380

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The structure of proteins; two hydrogen-bonded helical configurations of the polypeptide chain

16 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144265

A mechanism for toxin insertion into membranes is suggested by the crystal structure of the channel-forming domain of colicin E1

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144265

Protein structural segments and their interconnections derived from optical spectra. Thermal unfolding of ribonuclease T1 as an example.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144265

Methods to estimate the conformation of proteins and polypeptides from circular dichroism data

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144265

Knowledge-based protein secondary structure assignment

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144265

A self-consistent method for the analysis of protein secondary structure from circular dichroism.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144265

Quantitative analysis of vibrational circular dichroism spectra of proteins. Problems and perspectives.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144265

Estimation of protein secondary structure from the laser Raman amide I spectrum

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144265

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144265

Determination of the helix and beta form of proteins in aqueous solution by circular dichroism.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144265

Analysis of protein circular dichroism spectra for secondary structure using a simple matrix multiplication

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144265

Describing protein structure: a general algorithm yielding complete helicoidal parameters and a unique overall axis.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144265

Underlying assumptions in the estimation of secondary structure content in proteins by circular dichroism spectroscopy--a critical review

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144265

Beta-turns and their distortions: a proposed new nomenclature

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144265

Quantitative IR spectrophotometry of peptide compounds in water (H2O) solutions. III. Estimation of the protein secondary structure

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144265

Statistical analyses of the vibrational circular dichroism of selected proteins and relationship to secondary structures.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144265

Some problems of CD analyses of protein conformation

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144265

Improvement of protein secondary structure prediction by combination of statistical algorithms and circular dichroism

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144265

Quantitative analysis of protein far UV circular dichroism spectra by neural networks

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144265

Automatic identification of secondary structure in globular proteins

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144265

The Protein Data Bank: a computer-based archival file for macromolecular structures

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144265

Analysis of the accuracy and implications of simple methods for predicting the secondary structure of globular proteins

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144265

Protein secondary structure from circular dichroism spectroscopy. Combining variable selection principle and cluster analysis with neural network, ridge regression and self-consistent methods.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144265

Estimation of globular protein secondary structure from circular dichroism.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144265

Information content in the circular dichroism of proteins.

17 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2144265

Poly(pro)II helices in globular proteins: identification and circular dichroic analysis

17 August 2018

1 reference

12 December 2020

Computed circular dichroism spectra for the evaluation of protein conformation

1 reference

12 December 2020

A new approach to the calculation of secondary structures of globular proteins by optical rotatory dispersion and circular dichroism

1 reference

12 December 2020

Determination of protein secondary structure in solution by vacuum ultraviolet circular dichroism

1 reference

12 December 2020

Variable selection method improves the prediction of protein secondary structure from circular dichroism spectra

1 reference

12 December 2020

Estimation of protein secondary structure and error analysis from circular dichroism spectra

1 reference

12 December 2020

Identifiers

DOI

10.1110/PS.8.2.370

1 reference

16 October 2017

1 reference

16 October 2017

PubMed publication ID

10048330

1 reference