Potential energy functions for threading (Q41052943)

26 September 2017

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title

Potential energy functions for threading (English)

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26 September 2017

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2

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26 September 2017

1

Jones DT

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26 September 2017

publication date

1 April 1996

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Current Opinion in Structural Biology

26 September 2017

published in

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26 September 2017

volume

6

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26 September 2017

issue

2

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26 September 2017

page(s)

210-216

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A Method to Identify Protein Sequences That Fold into a Known Three-Dimensional Structure

26 September 2017

cites work

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Detection of native-like models for amino acid sequences of unknown three-dimensional structure in a data base of known protein conformations

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Contact potential that recognizes the correct folding of globular proteins

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An empirical energy function for threading protein sequence through the folding motif

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Prediction of protein structure by evaluation of sequence-structure fitness. Aligning sequences to contact profiles derived from three-dimensional structures

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Recognition of distantly related proteins through energy calculations

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Progress of 1D protein structure prediction at last

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Factors influencing the ability of knowledge-based potentials to identify native sequence-structure matches

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Development of pseudoenergy potentials for assessing protein 3-D-1-D compatibility and detecting weak homologies

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Polar and nonpolar atomic environments in the protein core: implications for folding and binding

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Solvation energy in protein folding and binding

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Discriminating compact nonnative structures from the native structure of globular proteins

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Why do protein architectures have Boltzmann-like statistics?

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Comparison of conformational characteristics in structurally similar protein pairs

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Protein superfamilies and domain superfolds

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Folding of peptide fragments comprising the complete sequence of proteins

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Nucleation, rapid folding, and globular intrachain regions in proteins

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Protein structure prediction by threading methods: evaluation of current techniques

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Successful protein fold recognition by optimal sequence threading validated by rigorous blind testing

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Ab initio structure prediction for small polypeptides and protein fragments using genetic algorithms.

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Identifiers

DOI

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26 September 2017

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