Folding rate prediction using total contact distance (Q40222014)

18 September 2017

Folding rate prediction using total contact distance (English)

1 reference

18 September 2017

Hongyi Zhou

1

1 reference

18 September 2017

Yaoqi Zhou

series ordinal

2

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18 September 2017

language of work or name

English

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publication date

1 January 2002

1 reference

18 September 2017

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18 September 2017

82

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18 September 2017

1 Pt 1

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18 September 2017

458-463

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Topology, stability, sequence, and length: defining the determinants of two-state protein folding kinetics

18 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302485

Transition-state structure as a unifying basis in protein-folding mechanisms: contact order, chain topology, stability, and the extended nucleus mechanism

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302485

First principles prediction of protein folding rates

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302485

A simple model for calculating the kinetics of protein folding from three-dimensional structures

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302485

Prediction of protein-folding mechanisms from free-energy landscapes derived from native structures

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302485

A theoretical search for folding/unfolding nuclei in three-dimensional protein structures

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302485

Structural changes in the transition state of protein folding: alternative interpretations of curved chevron plots

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302485

Rapid folding with and without populated intermediates in the homologous four-helix proteins Im7 and Im9.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302485

Slow folding of muscle acylphosphatase in the absence of intermediates.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302485

Folding kinetics of the SH3 domain of PI3 kinase by real-time NMR combined with optical spectroscopy

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302485

Contact order, transition state placement and the refolding rates of single domain proteins.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302485

Slow Cooperative Folding of a Small Globular Protein HPr

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302485

Protein folding kinetics exhibit an Arrhenius temperature dependence when corrected for the temperature dependence of protein stability

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302485

Thermodynamic properties of an extremely rapid protein folding reaction

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302485

Extremely rapid protein folding in the absence of intermediates

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302485

Comparison between long-range interactions and contact order in determining the folding rate of two-state proteins: application of long-range order to folding rate prediction

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302485

The roles of stability and contact order in determining protein folding rates

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302485

Global analysis of the effects of temperature and denaturant on the folding and unfolding kinetics of the N-terminal domain of the protein L9.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302485

How do small single-domain proteins fold?

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302485

Folding and stability of a tryptophan-containing mutant of ubiquitin

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302485

Evidence for a two-state transition in the folding process of the activation domain of human procarboxypeptidase A2.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302485

Glutamine, alanine or glycine repeats inserted into the loop of a protein have minimal effects on stability and folding rates

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302485

Loop length, intramolecular diffusion and protein folding

4 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302485

Remarkably slow folding of a small protein

4 November 2018

1 reference

https://api.crossref.org/works/10.1016/S0006-3495(02)75410-6

Microsecond protein folding through a compact transition state

7 January 2021

1 reference

https://api.crossref.org/works/10.1016/S0006-3495(02)75410-6

Folding studies of immunoglobulin-like β-sandwich proteins suggest that they share a common folding pathway

7 January 2021

1 reference

https://api.crossref.org/works/10.1016/S0006-3495(02)75410-6

Fast and One-step Folding of Closely and Distantly Related Homologous Proteins of a Four-helix Bundle Family

7 January 2021

1 reference

https://api.crossref.org/works/10.1016/S0006-3495(02)75410-6

A comparison of the folding kinetics and thermodynamics of two homologous fibronectin type III modules

7 January 2021

1 reference

https://api.crossref.org/works/10.1016/S0006-3495(02)75410-6

Folding of the disulfide-bonded beta-sheet protein tendamistat: rapid two-state folding without hydrophobic collapse

7 January 2021

1 reference

https://api.crossref.org/works/10.1016/S0006-3495(02)75410-6

Cooperative folding of a protein mini domain: the peripheral subunit-binding domain of the pyruvate dehydrogenase multienzyme complex 1 1Edited by P. E. Wright

7 January 2021

1 reference

https://api.crossref.org/works/10.1016/S0006-3495(02)75410-6

Submillisecond folding of the peripheral subunit-binding domain 1 1Edited by P. E. Wright

7 January 2021

1 reference

https://api.crossref.org/works/10.1016/S0006-3495(02)75410-6

Loop length, intramolecular diffusion and protein folding

7 January 2021

1 reference

https://api.crossref.org/works/10.1016/S0006-3495(02)75410-6

10.1016/S0006-3495(02)75410-6

7 January 2021

Identifiers

DOI

1 reference

18 September 2017

1 reference

18 September 2017

PubMed publication ID

11751332

1 reference