Stability of a melittin pore in a lipid bilayer: a molecular dynamics study (Q40160997)

18 September 2017

Stability of a melittin pore in a lipid bilayer: a molecular dynamics study (English)

1 reference

18 September 2017

Lin JH

1

1 reference

18 September 2017

Baumgaertner A

series ordinal

2

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18 September 2017

language of work or name

English

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publication date

1 April 2000

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18 September 2017

11

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based on heuristic

inferred from page(s)

published in

Biophysical Journal

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18 September 2017

78

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18 September 2017

4

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18 September 2017

1714-1724

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An alamethicin channel in a lipid bilayer: molecular dynamics simulations

18 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300768

Molecular dynamics simulation of melittin in a dimyristoylphosphatidylcholine bilayer membrane

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300768

A molecular dynamics study of the pores formed by Escherichia coli OmpF porin in a fully hydrated palmitoyloleoylphosphatidylcholine bilayer

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300768

Molecular dynamics simulation of a synthetic ion channel

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300768

Transmembrane four-helix bundle of influenza A M2 protein channel: structural implications from helix tilt and orientation

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300768

Molecular dynamics simulation of unsaturated lipid bilayers at low hydration: parameterization and comparison with diffraction studies

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300768

Sizing membrane pores in lipid vesicles by leakage of co-encapsulated markers: pore formation by melittin

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300768

Helix-helix interactions in lipid bilayers

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300768

Membrane pores induced by magainin

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300768

Molecular dynamics simulations of water within models of ion channels

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300768

Leakage of membrane vesicle contents: determination of mechanism using fluorescence requenching

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300768

Seven-helix bundles: molecular modeling via restrained molecular dynamics.

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300768

Molecular Dynamics Simulations of the Gramicidin Channel

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300768

The structure of melittin in the form I crystals and its implication for melittin's lytic and surface activities

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300768

The sting. Melittin forms channels in lipid bilayers

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300768

The actions of melittin on membranes

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300768

The biophysics of peptide models of ion channels

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300768

Molecular dynamics simulation of a phospholipid membrane

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300768

Kinetics and mechanism of hemolysis induced by melittin and by a synthetic melittin analogue

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300768

The structure of melittin in membranes

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300768

Structure and functions of channel-forming peptides: magainins, cecropins, melittin and alamethicin

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300768

Pore formation and translocation of melittin

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300768

The aggregation state of mellitin in lipid bilayers. An energy transfer study.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300768

The aggregation state of spin-labeled melittin in solution and bound to phospholipid membranes: evidence that membrane-bound melittin is monomeric.

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300768

Proline kinks in transmembrane alpha-helices

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300768

Kinetics of melittin induced pore formation in the membrane of lipid vesicles

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300768

Aggregation state of melittin in lipid vesicle membranes

15 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300768

Transmembrane helix structure, dynamics, and interactions: multi-nanosecond molecular dynamics simulations

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300768

An antimicrobial peptide, magainin 2, induced rapid flip-flop of phospholipids coupled with pore formation and peptide translocation.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300768

Action mechanism of amphipathic peptides gramicidin S and melittin on erythrocyte membrane

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300768

Study of vesicle leakage induced by melittin

20 August 2018

1 reference

https://api.crossref.org/works/10.1016/S0006-3495(00)76723-3

Molecular dynamics with coupling to an external bath

7 January 2021

1 reference

https://api.crossref.org/works/10.1016/S0006-3495(00)76723-3

Determining atom-centered monopoles from molecular electrostatic potentials. The need for high sampling density in formamide conformational analysis

7 January 2021

1 reference

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Molecular dynamics simulation of a bilayer of 200 lipids in the gel and in the liquid crystal phase

7 January 2021

1 reference

https://api.crossref.org/works/10.1016/S0006-3495(00)76723-3

Comparison of simple potential functions for simulating liquid water

7 January 2021

1 reference

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The OPLS [optimized potentials for liquid simulations] potential functions for proteins, energy minimizations for crystals of cyclic peptides and crambin

7 January 2021

1 reference

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MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures

7 January 2021

1 reference

https://api.crossref.org/works/10.1016/S0006-3495(00)76723-3

Modulation of magainin 2-lipid bilayer interactions by peptide charge

7 January 2021

1 reference

https://api.crossref.org/works/10.1016/S0006-3495(00)76723-3

Pore formation induced by the peptide melittin in different lipid vesicle membranes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016/S0006-3495(00)76723-3

Quantitative studies on the melittin-induced leakage mechanism of lipid vesicles

7 January 2021

1 reference

https://api.crossref.org/works/10.1016/S0006-3495(00)76723-3

Numerical integration of the cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016/S0006-3495(00)76723-3

Thermodynamic and kinetic studies on the association of melittin with a phospholipid bilayer

7 January 2021

1 reference

https://api.crossref.org/works/10.1016/S0006-3495(00)76723-3

Different states of self-association of melittin in phospholipid bilayers. A resonance energy transfer approach

7 January 2021

1 reference

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Osmotic pressure-induced pores in phospholipid vesicles

7 January 2021

1 reference

https://api.crossref.org/works/10.1016/S0006-3495(00)76723-3

Melittin lysis of red cells

7 January 2021

1 reference

https://api.crossref.org/works/10.1016/S0006-3495(00)76723-3

An all atom force field for simulations of proteins and nucleic acids

7 January 2021

1 reference

https://api.crossref.org/works/10.1016/S0006-3495(00)76723-3

Structure, energetics, and dynamics of lipid-protein interactions: A molecular dynamics study of the gramicidin A channel in a DMPC bilayer

7 January 2021

1 reference

https://api.crossref.org/works/10.1016/S0006-3495(00)76723-3

The structure of melittin. I. Structure determination and partial refinement

7 January 2021

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/10733954

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

A smooth particle mesh Ewald method

1 reference

https://api.crossref.org/works/10.1016/S0006-3495(00)76723-3

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1016/S0006-3495(00)76723-3

1 reference

18 September 2017

1 reference

18 September 2017

PubMed publication ID

10733954

1 reference