Molecular dynamics simulations of protein-tyrosine phosphatase 1B. I. ligand-induced changes in the protein motions (Q40146507)

17 September 2017

Molecular dynamics simulations of protein-tyrosine phosphatase 1B. I. ligand-induced changes in the protein motions (English)

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17 September 2017

Peters GH

1

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17 September 2017

Frimurer TM

series ordinal

2

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17 September 2017

Andersen JN

series ordinal

3

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17 September 2017

Olsen OH

series ordinal

4

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17 September 2017

language of work or name

English

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publication date

1 July 1999

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17 September 2017

11

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based on heuristic

inferred from page(s)

published in

Biophysical Journal

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17 September 2017

77

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17 September 2017

1

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17 September 2017

505-515

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Application of a Theory of Enzyme Specificity to Protein Synthesis

17 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300347

Visualization of the Cysteinyl-phosphate Intermediate of a Protein-tyrosine Phosphatase by X-ray Crystallography

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300347

A comparison of structural and dynamic properties of different simulation methods applied to SH3

22 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300347

Crystal structure of the dual specificity protein phosphatase VHR

22 September 2017

1 reference

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A common amino acid polymorphism in insulin receptor substrate-1 causes impaired insulin signaling. Evidence from transfection studies

22 September 2017

1 reference

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Gating of the active site of triose phosphate isomerase: Brownian dynamics simulations of flexible peptide loops in the enzyme

22 September 2017

1 reference

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Electrostatic calculations of side-chain pK(a) values in myoglobin and comparison with NMR data for histidines

22 September 2017

1 reference

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Crystal structure of human protein tyrosine phosphatase 1B

22 September 2017

1 reference

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Dissecting the catalytic mechanism of protein-tyrosine phosphatases

22 September 2017

1 reference

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Essential dynamics of proteins

22 September 2017

1 reference

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Regulation of scallop myosin by the regulatory light chain depends on a single glycine residue

22 September 2017

1 reference

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Crystal structure of Yersinia protein tyrosine phosphatase at 2.5 A and the complex with tungstate

22 September 2017

1 reference

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Protein-tyrosine phosphatases.

22 September 2017

1 reference

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Classical electrostatics in biology and chemistry

22 September 2017

1 reference

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Designed replacement of an internal hydration water molecule in BPTI: structural and functional implications of a glycine-to-serine mutation.

22 September 2017

1 reference

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Structural basis for phosphotyrosine peptide recognition by protein tyrosine phosphatase 1B

22 September 2017

1 reference

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Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

22 September 2017

1 reference

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Calculations of electrostatic interactions in biological systems and in solutions

22 September 2017

1 reference

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Stabilization of lambda repressor against thermal denaturation by site-directed Gly----Ala changes in alpha-helix 3.

22 September 2017

1 reference

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Diverse point mutations in the human glucose-6-phosphate dehydrogenase gene cause enzyme deficiency and mild or severe hemolytic anemia

22 September 2017

1 reference

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Refined structure of dienelactone hydrolase at 1.8 A

22 September 2017

1 reference

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WHAT IF: a molecular modeling and drug design program

22 September 2017

1 reference

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A Pro to Gly mutation in the hinge of the arabinose-binding protein enhances binding and alters specificity. Sugar-binding and crystallographic studies

22 September 2017

1 reference

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Structural diversity and evolution of human receptor-like protein tyrosine phosphatases

22 September 2017

1 reference

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Electrostatic Energy and Macromolecular Function

22 September 2017

1 reference

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Protein tyrosine phosphatases: a diverse family of intracellular and transmembrane enzymes

22 September 2017

1 reference

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The lipoprotein lipase Gly188----Glu mutation in South Africans of Indian descent: evidence suggesting common origins and an increased frequency

22 September 2017

1 reference

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Cloning, expression, and catalytic mechanism of the low molecular weight phosphotyrosyl protein phosphatase from bovine heart

22 September 2017

1 reference

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The Protein Data Bank: a computer-based archival file for macromolecular structures

22 September 2017

1 reference

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Movable lobes and flexible loops in proteins. Structural deformations that control biochemical activity

22 September 2017

1 reference

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Protein tyrosine phosphatases: characterization of extracellular and intracellular domains

25 September 2017

1 reference

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Prediction of pH-dependent properties of proteins

25 September 2017

1 reference

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Structure and function of the protein tyrosine phosphatases

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300347

Engineering protein mechanics: inhibition of concerted motions of the cellular retinol binding protein by site-directed mutagenesis.

25 September 2017

1 reference

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Rapid loop dynamics of Yersinia protein tyrosine phosphatases.

17 June 2018

1 reference

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Dynamics of proteins in different solvent systems: analysis of essential motion in lipases

17 June 2018

1 reference

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Catalytic function of the conserved hydroxyl group in the protein tyrosine phosphatase signature motif.

17 June 2018

1 reference

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Dynamics of the flexible loop of triosephosphate isomerase: the loop motion is not ligand gated

17 June 2018

1 reference

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Protein tyrosine phosphatase substrate specificity: size and phosphotyrosine positioning requirements in peptide substrates

17 June 2018

1 reference

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Collective motions in proteins: A covariance analysis of atomic fluctuations in molecular dynamics and normal mode simulations

17 June 2018

1 reference

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Evidence for protein-tyrosine-phosphatase catalysis proceeding via a cysteine-phosphate intermediate

17 June 2018

1 reference

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Pathological changes in the brain of a patient with familial Alzheimer's disease having a missense mutation at codon 717 in the amyloid precursor protein gene

17 June 2018

1 reference

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pK(a) calculations along a bacteriorhodopsin molecular dynamics trajectory

17 June 2018

1 reference

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Identifying the mechanism of protein loop closure: a molecular dynamics simulation of the Bacillus stearothermophilus LDH loop in solution.

20 August 2018

1 reference

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Dynamics of a flexible loop in dihydrofolate reductase from Escherichia coli and its implication for catalysis.

20 August 2018

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20 August 2018

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Identifiers

DOI

1 reference

17 September 2017

1 reference

17 September 2017

PubMed publication ID

10388775

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