An arc of unpaired "hinge bases" facilitates information exchange among functional centers of the ribosome (Q39128036)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17000775 AND SRC:MED&resulttype=core&format=json

19 December 2019

title

An arc of unpaired "hinge bases" facilitates information exchange among functional centers of the ribosome (English)

1 reference

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19 December 2019

2

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19 December 2019

author name string

Rasa Rakauskaite

series ordinal

1

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19 December 2019

language of work or name

English

0 references

publication date

25 September 2006

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17000775 AND SRC:MED&resulttype=core&format=json

Molecular and Cellular Biology

19 December 2019

published in

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19 December 2019

volume

26

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19 December 2019

issue

23

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19 December 2019

page(s)

8992-9002

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Elongation arrest by SecM via a cascade of ribosomal RNA rearrangements

19 December 2019

cites work

1 reference

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Identification of functionally important amino acids of ribosomal protein L3 by saturation mutagenesis.

9 September 2017

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Simulating movement of tRNA into the ribosome during decoding

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636827

Structural insights into translational fidelity

9 September 2017

1 reference

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Systematic analysis of bicistronic reporter assay data

9 September 2017

1 reference

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Evidence against a direct role for the Upf proteins in frameshifting or nonsense codon readthrough.

9 September 2017

1 reference

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Creating ribosomes with an all-RNA 30S subunit P site

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636827

Dynamic reorganization of the functionally active ribosome explored by normal mode analysis and cryo-electron microscopy

9 September 2017

1 reference

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An in vivo dual-luciferase assay system for studying translational recoding in the yeast Saccharomyces cerevisiae.

9 September 2017

1 reference

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Structures of five antibiotics bound at the peptidyl transferase center of the large ribosomal subunit

9 September 2017

1 reference

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Locking and unlocking of ribosomal motions

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636827

X-ray crystal structures of the WT and a hyper-accurate ribosome from Escherichia coli

9 September 2017

1 reference

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Selection of tRNA by the ribosome requires a transition from an open to a closed form

9 September 2017

1 reference

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Saturation mutagenesis of 5S rRNA in Saccharomyces cerevisiae.

9 September 2017

1 reference

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Crystal structure of the ribosome at 5.5 A resolution

9 September 2017

1 reference

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Genetic interaction between yeast Saccharomyces cerevisiae release factors and the decoding region of 18 S rRNA.

9 September 2017

1 reference

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Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636827

A ratchet-like inter-subunit reorganization of the ribosome during translocation

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636827

Relationship between internucleotide linkage geometry and the stability of RNA.

9 September 2017

1 reference

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The economics of ribosome biosynthesis in yeast

9 September 2017

1 reference

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Mutational analysis of the structure and localization of the nucleolus in the yeast Saccharomyces cerevisiae

9 September 2017

1 reference

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A Set of Vectors with a Tetracycline-Regulatable Promoter System for Modulated Gene Expression in Saccharomyces cerevisiae

9 September 2017

1 reference

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Transformation of intact yeast cells treated with alkali cations

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636827

Inhibitors of protein biosynthesis. II. Mode of action of anisomycin

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636827

The poly(A) binding protein is required for poly(A) shortening and 60S ribosomal subunit-dependent translation initiation

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636827

Synthesis of large rRNAs by RNA polymerase II in mutants of Saccharomyces cerevisiae defective in RNA polymerase I

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636827

An approach for isolation of mutants defective in 35S ribosomal RNA synthesis in Saccharomyces cerevisiae

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636827

Ribosomal frameshifting efficiency and gag/gag-pol ratio are critical for yeast M1 double-stranded RNA virus propagation

9 September 2017

1 reference

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Multifunctional yeast high-copy-number shuttle vectors

9 September 2017

1 reference

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Two chromosomal genes required for killing expression in killer strains of Saccharomyces cerevisiae

9 September 2017

1 reference

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Electron microscopic heteroduplex analysis of "killer" double-stranded RNA species from yeast

9 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1636827

Complete deletion of yeast chromosomal rDNA repeats and integration of a new rDNA repeat: use of rDNA deletion strains for functional analysis of rDNA promoter elements in vivo

9 September 2017

1 reference

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Multiple effects of S13 in modulating the strength of intersubunit interactions in the ribosome during translation

14 September 2017

1 reference

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Identification of an RNA-protein bridge spanning the ribosomal subunit interface

14 September 2017

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Interpretation of binding curves obtained with high receptor concentrations: practical aid for computer analysis

15 June 2018

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Structural analysis of RNA using chemical and enzymatic probing monitored by primer extension

15 June 2018

1 reference

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Ribosomal Proteins S12 and S13 Function as Control Elements for Translocation of the mRNA:tRNA Complex

15 June 2018

1 reference

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Peptidyl-tRNA regulates the GTPase activity of translation factors

21 August 2018

1 reference

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RNA Kink-Turns as Molecular Elbows: Hydration, Cation Binding, and Large-Scale Dynamics

21 August 2018

1 reference

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Ribosomal RNA Kink-turn Motif—A Flexible Molecular Hinge

21 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17000775

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Development and application of an in vivo system to study yeast ribosomal RNA biogenesis and function

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17000775

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The conserved A-site finger of the 23S rRNA: just one of the intersubunit bridges or a part of the allosteric communication pathway?

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17000775

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1128/MCB.01311-06

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17000775 AND SRC:MED&resulttype=core&format=json

19 December 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17000775 AND SRC:MED&resulttype=core&format=json

19 December 2019

PubMed publication ID

17000775

1 reference