Removal of batch effects using distribution-matching residual networks. (Q38832342)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28419223 AND SRC:MED&resulttype=core&format=json

18 March 2020

title

Removal of batch effects using distribution-matching residual networks (English)

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18 March 2020

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6

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18 March 2020

author name string

Uri Shaham

1

1 reference

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18 March 2020

Kelly P Stanton

2

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18 March 2020

Jun Zhao

3

1 reference

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18 March 2020

Huamin Li

4

1 reference

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18 March 2020

Khadir Raddassi

5

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18 March 2020

Yuval Kluger

7

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18 March 2020

language of work or name

English

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publication date

1 August 2017

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18 March 2020

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28419223 AND SRC:MED&resulttype=core&format=json

18 March 2020

volume

33

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18 March 2020

issue

16

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18 March 2020

page(s)

2539-2546

1 reference

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Standardization and quality control for high-dimensional mass cytometry studies of human samples

18 March 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5870543

Comprehensive Classification of Retinal Bipolar Neurons by Single-Cell Transcriptomics

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5870543

Mass Cytometry: Single Cells, Many Features

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5870543

Methods that remove batch effects while retaining group differences may lead to exaggerated confidence in downstream analyses

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5870543

Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5870543

Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5870543

Smart-seq2 for sensitive full-length transcriptome profiling in single cells.

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5870543

Normalization of mass cytometry data with bead standards

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5870543

The sva package for removing batch effects and other unwanted variation in high-throughput experiments

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5870543

Tackling the widespread and critical impact of batch effects in high-throughput data

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5870543

Per-channel basis normalization methods for flow cytometry data

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5870543

Capturing heterogeneity in gene expression studies by surrogate variable analysis

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5870543

Adjusting batch effects in microarray expression data using empirical Bayes methods

15 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5870543

10.1093/BIOINFORMATICS/BTX196

15 September 2018

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28419223 AND SRC:MED&resulttype=core&format=json

18 March 2020

1 reference

journals/bioinformatics/ShahamSZLRMK17

1 reference

DBLP Dataset 2021-01-02

28 January 2021

0 references

1 reference

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18 March 2020

PubMed publication ID

28419223

1 reference