Non-coding RNAs: Classification, Biology and Functioning (Q38826549)

6 September 2017

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title

Non-coding RNAs: Classification, Biology and Functioning (English)

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6 September 2017

Sonja Hombach

1

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6 September 2017

Markus Kretz

series ordinal

2

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6 September 2017

language of work or name

English

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publication date

1 January 2016

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Advances in Experimental Medicine and Biology

6 September 2017

published in

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6 September 2017

volume

937

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6 September 2017

page(s)

3-17

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Non-coding RNAs: lessons from the small nuclear and small nucleolar RNAs

6 September 2017

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MicroRNAs in Stress Signaling and Human Disease

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Assembly and function of small RNA - argonaute protein complexes

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Non-coding RNAs: the architects of eukaryotic complexity

21 January 2018

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Finishing the euchromatic sequence of the human genome

21 January 2018

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Landscape of transcription in human cells

21 January 2018

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Genome-wide computational identification and manual annotation of human long noncoding RNA genes

21 January 2018

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Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses

21 January 2018

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Repression of the human dihydrofolate reductase gene by a non-coding interfering transcript

21 January 2018

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The Evf-2 noncoding RNA is transcribed from the Dlx-5/6 ultraconserved region and functions as a Dlx-2 transcriptional coactivator

21 January 2018

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Balanced gene regulation by an embryonic brain ncRNA is critical for adult hippocampal GABA circuitry

21 January 2018

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The Long Noncoding RNA, Jpx, Is a Molecular Switch for X Chromosome Inactivation

21 January 2018

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Lessons from X-chromosome inactivation: long ncRNA as guides and tethers to the epigenome

21 January 2018

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X-inactivation, imprinting, and long noncoding RNAs in health and disease

21 January 2018

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Parental imprinting of the mouse H19 gene

21 January 2018

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The non-coding Air RNA is required for silencing autosomal imprinted genes

21 January 2018

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Elongation of the Kcnq1ot1 transcript is required for genomic imprinting of neighboring genes

21 January 2018

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Uncoupling antisense-mediated silencing and DNA methylation in the imprinted Gnas cluster.

21 January 2018

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https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Direct visualization of the co-transcriptional assembly of a nuclear body by noncoding RNAs

21 January 2018

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https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Topological organization of multichromosomal regions by the long intergenic noncoding RNA Firre

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

The lncRNA Firre anchors the inactive X chromosome to the nucleolus by binding CTCF and maintains H3K27me3 methylation

21 January 2018

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https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Non-coding RNAs in human disease

21 January 2018

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https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

The hallmarks of cancer: a long non-coding RNA point of view.

21 January 2018

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Gene silencing by microRNAs: contributions of translational repression and mRNA decay

21 January 2018

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https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

MicroRNAs in Development and Disease

21 January 2018

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https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Most mammalian mRNAs are conserved targets of microRNAs

21 January 2018

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https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

MicroRNA biogenesis pathways in cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

MicroRNA regulatory networks in cardiovascular development

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

MicroRNAs as therapeutic targets and biomarkers of cardiovascular disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Determining the role of microRNAs in psychiatric disorders

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Regulation of microRNA biogenesis and function

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Towards a molecular understanding of microRNA-mediated gene silencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

A Biogenesis Step Upstream of Microprocessor Controls miR-17∼92 Expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

PIWI-interacting RNAs: from generation to transgenerational epigenetics

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Ancient endo-siRNA pathways reveal new tricks

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

RNA interference-mediated intrinsic antiviral immunity in invertebrates.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

RNA interference-mediated intrinsic antiviral immunity in plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Induction and evasion of type I interferon responses by influenza viruses

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Specific interference with gene expression induced by long, double-stranded RNA in mouse embryonal teratocarcinoma cell lines.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

RNA interference functions as an antiviral immunity mechanism in mammals

21 January 2018

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https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Antiviral RNA interference in mammalian cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Distinct antiviral responses in pluripotent versus differentiated cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Pseudogene-derived small interfering RNAs regulate gene expression in mouse oocytes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Endogenous siRNAs from naturally formed dsRNAs regulate transcripts in mouse oocytes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

A human snoRNA with microRNA-like functions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Human box C/D snoRNAs with miRNA like functions: expanding the range of regulatory RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Small RNAs derived from longer non-coding RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

The noncoding RNAs SNORD50A and SNORD50B bind K-Ras and are recurrently deleted in human cancer

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Human tRNA-derived small RNAs in the global regulation of RNA silencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Slicing tRNAs to boost functional ncRNA diversity

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Biogenesis and function of tRNA fragments during sperm maturation and fertilization in mammals

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Endogenous tRNA-Derived Fragments Suppress Breast Cancer Progression via YBX1 Displacement

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Long noncoding RNAs: past, present, and future

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Considerations when investigating lncRNA function in vivo.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Modular regulatory principles of large non-coding RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Structure and function of long noncoding RNAs in epigenetic regulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Long noncoding RNAs: cellular address codes in development and disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

The rise of regulatory RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Molecular Mechanisms of Long Noncoding RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Evf2 (Dlx6as) lncRNA regulates ultraconserved enhancer methylation and the differential transcriptional control of adjacent genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Widespread transcription at neuronal activity-regulated enhancers

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

eRNAs are required for p53-dependent enhancer activity and gene transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Genome-wide profiling of p53-regulated enhancer RNAs uncovers a subset of enhancers controlled by a lncRNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Transcription factor trapping by RNA in gene regulatory elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

The long non-coding RNA Paupar regulates the expression of both local and distal genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Activating RNAs associate with Mediator to enhance chromatin architecture and transcription

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

The tissue-specific lncRNA Fendrr is an essential regulator of heart and body wall development in the mouse

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Long noncoding RNA as modular scaffold of histone modification complexes

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

MEN epsilon/beta nuclear-retained non-coding RNAs are up-regulated upon muscle differentiation and are essential components of paraspeckles

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Altered nuclear retention of mRNAs containing inverted repeats in human embryonic stem cells: functional role of a nuclear noncoding RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

An architectural role for a nuclear noncoding RNA: NEAT1 RNA is essential for the structure of paraspeckles

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Polycomb proteins targeted by a short repeat RNA to the mouse X chromosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Posttranscriptional gene regulation by long noncoding RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

lncRNAs transactivate STAU1-mediated mRNA decay by duplexing with 3' UTRs via Alu elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Epidermal homeostasis: a balancing act of stem cells in the skin

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Control of somatic tissue differentiation by the long non-coding RNA TINCR.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

The non-coding skin: exploring the roles of long non-coding RNAs in epidermal homeostasis and disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

A LncRNA-MAF:MAFB transcription factor network regulates epidermal differentiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

CALML5 is a ZNF750- and TINCR-induced protein that binds stratifin to regulate epidermal differentiation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

LincRNA-p21 suppresses target mRNA translation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Emerging Roles for Natural MicroRNA Sponges

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

A ceRNA hypothesis: the Rosetta Stone of a hidden RNA language?

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Endogenous miRNA sponge lincRNA-RoR regulates Oct4, Nanog, and Sox2 in human embryonic stem cell self-renewal

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

The multilayered complexity of ceRNA crosstalk and competition

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

A coding-independent function of gene and pseudogene mRNAs regulates tumour biology

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Expression of versican 3'-untranslated region modulates endogenous microRNA functions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

In vivo identification of tumor- suppressive PTEN ceRNAs in an oncogenic BRAF-induced mouse model of melanoma

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Coding-independent regulation of the tumor suppressor PTEN by competing endogenous mRNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

PTEN ceRNA networks in human cancer.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

A long noncoding RNA controls muscle differentiation by functioning as a competing endogenous RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

A feedforward regulatory loop between HuR and the long noncoding RNA linc-MD1 controls early phases of myogenesis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

The imprinted H19 lncRNA antagonizes let-7 microRNAs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Detecting and characterizing circular RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Natural RNA circles function as efficient microRNA sponges

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Circular RNAs are a large class of animal RNAs with regulatory potency

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

The transcriptional landscape of the mammalian genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Antisense transcription in the mammalian transcriptome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

The FANTOM web resource: from mammalian transcriptional landscape to its dynamic regulation

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Small peptides switch the transcriptional activity of Shavenbaby during Drosophila embryogenesis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

A micropeptide encoded by a putative long noncoding RNA regulates muscle performance

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

An Apela RNA-Containing Negative Feedback Loop Regulates p53-Mediated Apoptosis in Embryonic Stem Cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Genomic maps of long noncoding RNA occupancy reveal principles of RNA-chromatin interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

The genomic binding sites of a noncoding RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

The Xist lncRNA exploits three-dimensional genome architecture to spread across the X chromosome

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Technologies to probe functions and mechanisms of long noncoding RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Systematic discovery of Xist RNA binding proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

The Xist lncRNA interacts directly with SHARP to silence transcription through HDAC3.

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

The imprinted antisense RNA at the Igf2r locus overlaps but does not imprint Mas1

21 January 2018

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

The widespread regulation of microRNA biogenesis, function and decay

31 March 2020

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

The long non-coding RNA Fendrr links epigenetic control mechanisms to gene regulatory networks in mammalian embryogenesis.

31 March 2020

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Erratum: Regulation of cytoplasmic mRNA decay

31 March 2020

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

Chromosomes. A comprehensive Xist interactome reveals cohesin repulsion and an RNA-directed chromosome conformation

31 March 2020

1 reference

https://api.crossref.org/works/10.1007/978-3-319-42059-2_1

10.1007/978-3-319-42059-2_1

31 March 2020

Identifiers

DOI

1 reference

6 September 2017

1 reference