Noncoding RNAs as epigenetic mediators of skeletal muscle regeneration (Q38284580)

1 September 2017

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title

Noncoding RNAs as epigenetic mediators of skeletal muscle regeneration (English)

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1 September 2017

Gurjeev Sohi

1

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1 September 2017

Francis Jeffrey Dilworth

series ordinal

2

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1 September 2017

language of work or name

English

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publication date

12 January 2015

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1 September 2017

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1 September 2017

volume

282

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1 September 2017

issue

9

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1 September 2017

page(s)

1630-1646

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Central Dogma of Molecular Biology

1 September 2017

cites work

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RNA world - the dark matter of evolutionary genomics

21 January 2018

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Serial analysis of gene expression

21 January 2018

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5' Long serial analysis of gene expression (LongSAGE) and 3' LongSAGE for transcriptome characterization and genome annotation

21 January 2018

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Cap analysis gene expression for high-throughput analysis of transcriptional starting point and identification of promoter usage

21 January 2018

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Mapping and quantifying mammalian transcriptomes by RNA-Seq

21 January 2018

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Landscape of transcription in human cells

21 January 2018

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21 January 2018

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Regulation of microRNA biogenesis

21 January 2018

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MicroRNAs: genomics, biogenesis, mechanism, and function

21 January 2018

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The nuclear RNase III Drosha initiates microRNA processing

21 January 2018

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Nuclear export of microRNA precursors

21 January 2018

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Intronic microRNA precursors that bypass Drosha processing

21 January 2018

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Import routes and nuclear functions of Argonaute and other small RNA-silencing proteins.

21 January 2018

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Argonaute2 is the catalytic engine of mammalian RNAi

21 January 2018

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Dual role for argonautes in microRNA processing and posttranscriptional regulation of microRNA expression.

21 January 2018

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Promoter RNA links transcriptional regulation of inflammatory pathway genes

21 January 2018

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MicroRNA-directed transcriptional gene silencing in mammalian cells

21 January 2018

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Essential role for Dicer during skeletal muscle development.

21 January 2018

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Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals

21 January 2018

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Structure and function of long noncoding RNAs in epigenetic regulation

21 January 2018

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Examples of the complex architecture of the human transcriptome revealed by RACE and high-density tiling arrays

21 January 2018

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The expanding RNA polymerase III transcriptome

21 January 2018

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RNA maps reveal new RNA classes and a possible function for pervasive transcription

21 January 2018

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Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses

21 January 2018

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Long noncoding RNAs: cellular address codes in development and disease

21 January 2018

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Extensive localization of long noncoding RNAs to the cytosol and mono- and polyribosomal complexes

21 January 2018

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A long noncoding RNA controls muscle differentiation by functioning as a competing endogenous RNA

21 January 2018

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Endogenous miRNA sponge lincRNA-RoR regulates Oct4, Nanog, and Sox2 in human embryonic stem cell self-renewal

21 January 2018

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Requirement for Xist in X chromosome inactivation

21 January 2018

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The Air noncoding RNA epigenetically silences transcription by targeting G9a to chromatin

21 January 2018

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Genomic maps of long noncoding RNA occupancy reveal principles of RNA-chromatin interactions

21 January 2018

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Role of histone H3 lysine 27 methylation in X inactivation

21 January 2018

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The noncoding RNA Mistral activates Hoxa6 and Hoxa7 expression and stem cell differentiation by recruiting MLL1 to chromatin

21 January 2018

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Genome-wide Identification of Polycomb-Associated RNAs by RIP-seq

21 January 2018

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The Nuclear-Retained Noncoding RNA MALAT1 Regulates Alternative Splicing by Modulating SR Splicing Factor Phosphorylation

21 January 2018

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The long non-coding RNA Gomafu is acutely regulated in response to neuronal activation and involved in schizophrenia-associated alternative splicing.

21 January 2018

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Regulation of pri-miRNA Processing by a Long Noncoding RNA Transcribed from an Ultraconserved Region

21 January 2018

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Human colorectal cancer-specific CCAT1-L lncRNA regulates long-range chromatin interactions at the MYC locus

21 January 2018

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A long ncRNA links copy number variation to a polycomb/trithorax epigenetic switch in FSHD muscular dystrophy

21 January 2018

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A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression

21 January 2018

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Direct visualization of the co-transcriptional assembly of a nuclear body by noncoding RNAs

21 January 2018

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ncRNA- and Pc2 methylation-dependent gene relocation between nuclear structures mediates gene activation programs

21 January 2018

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A natural antisense transcript regulates Zeb2/Sip1 gene expression during Snail1-induced epithelial-mesenchymal transition

21 January 2018

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Long non-coding antisense RNA controls Uchl1 translation through an embedded SINEB2 repeat.

21 January 2018

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LincRNA-p21 suppresses target mRNA translation

21 January 2018

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Control of somatic tissue differentiation by the long non-coding RNA TINCR.

21 January 2018

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lncRNAs transactivate STAU1-mediated mRNA decay by duplexing with 3' UTRs via Alu elements

21 January 2018

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A coding-independent function of gene and pseudogene mRNAs regulates tumour biology

21 January 2018

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miRNA-dependent gene silencing involving Ago2-mediated cleavage of a circular antisense RNA

21 January 2018

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Circular RNAs are a large class of animal RNAs with regulatory potency

21 January 2018

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Target mimicry provides a new mechanism for regulation of microRNA activity

21 January 2018

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Natural RNA circles function as efficient microRNA sponges

21 January 2018

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Satellite cell of skeletal muscle fibers

21 January 2018

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Lying low but ready for action: the quiescent muscle satellite cell

21 January 2018

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Asymmetric self-renewal and commitment of satellite stem cells in muscle.

21 January 2018

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Wnt7a activates the planar cell polarity pathway to drive the symmetric expansion of satellite stem cells

21 January 2018

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Epigenetic control of adult skeletal muscle stem cell functions

21 January 2018

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The origin and fate of muscle satellite cells.

21 January 2018

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Pax7 activates myogenic genes by recruitment of a histone methyltransferase complex.

21 January 2018

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Muscle satellite cells are primed for myogenesis but maintain quiescence with sequestration of Myf5 mRNA targeted by microRNA-31 in mRNP granules

21 January 2018

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Chromatin modifications as determinants of muscle stem cell quiescence and chronological aging.

21 January 2018

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Maintenance of muscle stem-cell quiescence by microRNA-489

21 January 2018

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miR-195/497 induce postnatal quiescence of skeletal muscle stem cells

21 January 2018

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Mammalian stress granules and processing bodies

21 January 2018

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Eukaryotic stress granules: the ins and outs of translation

21 January 2018

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A feedforward regulatory loop between HuR and the long noncoding RNA linc-MD1 controls early phases of myogenesis.

21 January 2018

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Role of HuR in skeletal myogenesis through coordinate regulation of muscle differentiation genes

21 January 2018

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Destabilization of nucleophosmin mRNA by the HuR/KSRP complex is required for muscle fibre formation

21 January 2018

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Muscle satellite cell proliferation and association: new insights from myofiber time-lapse imaging

21 January 2018

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Deregulated expression of miR-26a and Ezh2 in rhabdomyosarcoma

21 January 2018

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The microRNA signature in response to insulin reveals its implication in the transcriptional action of insulin in human skeletal muscle and the role of a sterol regulatory element-binding protein-1c/myocyte enhancer factor 2C pathway

21 January 2018

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Simultaneous miRNA and mRNA transcriptome profiling of human myoblasts reveals a novel set of myogenic differentiation-associated miRNAs and their target genes

21 January 2018

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The role of microRNA-1 and microRNA-133 in skeletal muscle proliferation and differentiation

21 January 2018

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MicroRNA-133 controls brown adipose determination in skeletal muscle satellite cells by targeting Prdm16

21 January 2018

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MyomiR-133 regulates brown fat differentiation through Prdm16.

21 January 2018

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Insulin-like growth factor-1 receptor is regulated by microRNA-133 during skeletal myogenesis

21 January 2018

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A novel target of microRNA-29, Ring1 and YY1-binding protein (Rybp), negatively regulates skeletal myogenesis

21 January 2018

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TGF-β Regulates miR-206 and miR-29 to Control Myogenic Differentiation through Regulation of HDAC4

21 January 2018

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HDAC4 promotes Pax7-dependent satellite cell activation and muscle regeneration

21 January 2018

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A Novel YY1-miR-1 regulatory circuit in skeletal myogenesis revealed by genome-wide prediction of YY1-miRNA network

21 January 2018

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Genome-wide survey by ChIP-seq reveals YY1 regulation of lincRNAs in skeletal myogenesis.

21 January 2018

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NF-kappaB-YY1-miR-29 regulatory circuitry in skeletal myogenesis and rhabdomyosarcoma

21 January 2018

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Comparative expression profiling identifies differential roles for Myogenin and p38α MAPK signaling in myogenesis

21 January 2018

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Differential modulation of cell cycle progression distinguishes members of the myogenic regulatory factor family of transcription factors

21 January 2018

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Genome-wide MyoD binding in skeletal muscle cells: a potential for broad cellular reprogramming.

21 January 2018

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miR-203b: a novel regulator of MyoD expression in tilapia skeletal muscle

21 January 2018

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IGF-II is regulated by microRNA-125b in skeletal myogenesis

21 January 2018

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MicroRNA-378 targets the myogenic repressor MyoR during myoblast differentiation

21 January 2018

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miR-206 and -486 induce myoblast differentiation by downregulating Pax7

21 January 2018

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MyoD regulates apoptosis of myoblasts through microRNA-mediated down-regulation of Pax3

21 January 2018

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eRNAs promote transcription by establishing chromatin accessibility at defined genomic loci

21 January 2018

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The H19 long noncoding RNA gives rise to microRNAs miR-675-3p and miR-675-5p to promote skeletal muscle differentiation and regeneration

21 January 2018

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The RNA helicases p68/p72 and the noncoding RNA SRA are coregulators of MyoD and skeletal muscle differentiation

21 January 2018

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c-Myc-regulated microRNAs modulate E2F1 expression

21 January 2018

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An E2F/miR-20a autoregulatory feedback loop.

21 January 2018

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Activation of miR-17-92 by NK-like homeodomain proteins suppresses apoptosis via reduction of E2F1 in T-cell acute lymphoblastic leukemia

21 January 2018

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A kinase shRNA screen links LATS2 and the pRB tumor suppressor

21 January 2018

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MicroRNA-31 regulated by the extracellular regulated kinase is involved in vascular smooth muscle cell growth via large tumor suppressor homolog 2.

21 January 2018

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Genetic analysis of p38 MAP kinases in myogenesis: fundamental role of p38alpha in abrogating myoblast proliferation

21 January 2018

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Attenuation of p38-mediated miR-1/133 expression facilitates myoblast proliferation during the early stage of muscle regeneration

21 January 2018

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Role of the mTORC1 complex in satellite cell activation by RNA-induced mitochondrial restoration: dual control of cyclin D1 through microRNAs

21 January 2018

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Fiber types in mammalian skeletal muscles

21 January 2018

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A family of microRNAs encoded by myosin genes governs myosin expression and muscle performance

21 January 2018

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Six homeoproteins and a Iinc-RNA at the fast MYH locus lock fast myofiber terminal phenotype

21 January 2018

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Myostatin-induced inhibition of the long noncoding RNA Malat1 is associated with decreased myogenesis

21 January 2018

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microRNA-9 targets the long non-coding RNA MALAT1 for degradation in the nucleus

21 January 2018

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Biology and Mechanisms of Short RNAs in Caenorhabditis elegans

21 January 2018

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MicroRNA-373 induces expression of genes with complementary promoter sequences

21 January 2018

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Polycombs and microRNA-223 regulate human granulopoiesis by transcriptional control of target gene expression.

21 January 2018

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Site-specific DICER and DROSHA RNA products control the DNA-damage response

21 January 2018

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Argonaute proteins couple chromatin silencing to alternative splicing.

21 January 2018

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CRISPR-mediated modular RNA-guided regulation of transcription in eukaryotes

21 January 2018

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MicroRNA1 influences cardiac differentiation in Drosophila and regulates Notch signaling

21 January 2018

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MicroRNAs play an essential role in the development of cardiac hypertrophy

21 January 2018

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miR-1 exacerbates cardiac ischemia-reperfusion injury in mouse models

21 January 2018

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Serum response factor regulates a muscle-specific microRNA that targets Hand2 during cardiogenesis

21 January 2018

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microRNA-1 and microRNA-206 regulate skeletal muscle satellite cell proliferation and differentiation by repressing Pax7

21 January 2018

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Overexpression of microRNA-1 promotes cardiomyocyte commitment from human cardiovascular progenitors via suppressing WNT and FGF signaling pathways

21 January 2018

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An SRF/miR-1 axis regulates NCX1 and annexin A5 protein levels in the normal and failing heart

21 January 2018

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Muscle-specific microRNA1 (miR1) targets heat shock protein 70 (HSP70) during dexamethasone-mediated atrophy.

21 January 2018

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Overexpression of microRNA-1 impairs cardiac contractile function by damaging sarcomere assembly.

21 January 2018

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miR-1 mediated suppression of Sorcin regulates myocardial contractility through modulation of Ca2 signaling

21 January 2018

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Tinman/Nkx2-5 acts via miR-1 and upstream of Cdc42 to regulate heart function across species

21 January 2018

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MicroRNA-1 Regulates Smooth Muscle Cell Differentiation by Repressing Kruppel-Like Factor 4

21 January 2018

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Attenuation of microRNA-1 derepresses the cytoskeleton regulatory protein twinfilin-1 to provoke cardiac hypertrophy

21 January 2018

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Reciprocal regulation of microRNA-1 and insulin-like growth factor-1 signal transduction cascade in cardiac and skeletal muscle in physiological and pathological conditions

21 January 2018

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MicroRNA-1/206 targets c-Met and inhibits rhabdomyosarcoma development

21 January 2018

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MicroRNA-1 regulates cardiomyocyte apoptosis by targeting Bcl-2

21 January 2018

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MicroRNA-1 negatively regulates expression of the hypertrophy-associated calmodulin and Mef2a genes

21 January 2018

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miR-1 overexpression enhances Ca(2 ) release and promotes cardiac arrhythmogenesis by targeting PP2A regulatory subunit B56alpha and causing CaMKII-dependent hyperphosphorylation of RyR2

21 January 2018

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Notch3 and Mef2c proteins are mutually antagonistic via Mkp1 protein and miR-1/206 microRNAs in differentiating myoblasts

21 January 2018

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microRNA-133a regulates cardiomyocyte proliferation and suppresses smooth muscle gene expression in the heart

21 January 2018

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MicroRNA-133 controls cardiac hypertrophy

21 January 2018

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A feedback circuit between miR-133 and the ERK1/2 pathway involving an exquisite mechanism for regulating myoblast proliferation and differentiation

21 January 2018

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miR-133a regulates adipocyte browning in vivo

21 January 2018

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NFATc4 is negatively regulated in miR-133a-mediated cardiomyocyte hypertrophic repression

21 January 2018

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MicroRNA-133 regulates the expression of GLUT4 by targeting KLF15 and is involved in metabolic control in cardiac myocytes

21 January 2018

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miR-133 and miR-30 regulate connective tissue growth factor: implications for a role of microRNAs in myocardial matrix remodeling

21 January 2018

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MicroRNAs regulate the expression of the alternative splicing factor nPTB during muscle development

21 January 2018

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MIR-206 regulates connexin43 expression during skeletal muscle development

21 January 2018

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Converging pathways involving microRNA-206 and the RNA-binding protein KSRP control post-transcriptionally utrophin A expression in skeletal muscle.

21 January 2018

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miR-206 represses hypertrophy of myogenic cells but not muscle fibers via inhibition of HDAC4

21 January 2018

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Hmgb3 is regulated by microRNA-206 during muscle regeneration

21 January 2018

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HMGB1 attenuates cardiac remodelling in the failing heart via enhanced cardiac regeneration and miR-206-mediated inhibition of TIMP-3

21 January 2018

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miR-1/miR-206 regulate Hsp60 expression contributing to glucose-mediated apoptosis in cardiomyocytes

21 January 2018

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Insulin promotes vascular smooth muscle cell proliferation via microRNA-208-mediated downregulation of p21.

21 January 2018

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Regulation of PI3-kinase/Akt signaling by muscle-enriched microRNA-486

21 January 2018

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miR-499 protects cardiomyocytes from H 2O 2-induced apoptosis via its effects on Pdcd4 and Pacs2.

21 January 2018

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MiR-499 regulates cell proliferation and apoptosis during late-stage cardiac differentiation via Sox6 and cyclin D1

21 January 2018

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Regulation of the SK3 channel by microRNA-499--potential role in atrial fibrillation

21 January 2018

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21 January 2018

Identifiers

DOI

10.1111/FEBS.13170

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1 September 2017

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