Aspergilli: systems biology and industrial applications (Q38034488)

27 August 2017

title

Aspergilli: systems biology and industrial applications (English)

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27 August 2017

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2

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27 August 2017

Christoph Knuf

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27 August 2017

language of work or name

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14 August 2012

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27 August 2017

published in

Biotechnology Journal

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27 August 2017

volume

7

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27 August 2017

issue

9

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27 August 2017

page(s)

1147-1155

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https://api.crossref.org/works/10.1002/BIOT.201200169

27 August 2017

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The complete genome sequence of Escherichia coli K-12

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

On the safety of Aspergillus niger--a review.

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

21 January 2018

Citric acid production

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https://api.crossref.org/works/10.1002/BIOT.201200169

Toward a science of metabolic engineering

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Network rigidity and metabolic engineering in metabolite overproduction.

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Industrial systems biology

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Genome-scale models of microbial cells: evaluating the consequences of constraints

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Mathematical models of cell factories: moving towards the core of industrial biotechnology

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Uncovering transcriptional regulation of metabolism by using metabolic network topology

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Architecture of transcriptional regulatory circuits is knitted over the topology of bio-molecular interaction networks

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Integration of metabolome data with metabolic networks reveals reporter reactions

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Current status of systems biology in Aspergilli

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Nucleotide sequence of bacteriophage φX174 DNA

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Next-generation DNA sequencing

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

RNA sequencing: advances, challenges and opportunities

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Improved annotation through genome-scale metabolic modeling of Aspergillus oryzae

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Comparative genomics of citric-acid-producing Aspergillus niger ATCC 1015 versus enzyme-producing CBS 513.88

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Metabolic engineering: techniques for analysis of targets for genetic manipulations

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Metabolic control analysis. Sensitivity of control coefficients to elasticities.

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Smooth bistable S-systems

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Modeling approach to control of carbohydrate metabolism during citric acid accumulation by Aspergillus niger: II. Sensitivity analysis

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Metabolism of citric acid production by Aspergillus niger: model definition, steady-state analysis and constrained optimization of citric acid production rate

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Metabolic network driven analysis of genome-wide transcription data from Aspergillus nidulans

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Metabolic model integration of the bibliome, genome, metabolome and reactome of Aspergillus niger

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Reconstruction of the central carbon metabolism of Aspergillus niger

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Metabolic flux analysis using stoichiometric models for Aspergillus niger: comparison under glucoamylase-producing and non-producing conditions

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

A trispecies Aspergillus microarray: comparative transcriptomics of three Aspergillus species

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Genome-wide analysis of maltose utilization and regulation in aspergilli

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Uncovering transcriptional regulation of glycerol metabolism in Aspergilli through genome-wide gene expression data analysis

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Proteomics of eukaryotic microorganisms: The medically and biotechnologically important fungal genus Aspergillus

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Proteomics of filamentous fungi

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Global analysis of protein activities using proteome chips

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

The post-genomic era of interactive proteomics: facts and perspectives

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Analyzing yeast protein-protein interaction data obtained from different sources

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Proteome analysis of Aspergillus fumigatus total membrane proteins identifies proteins associated with the glycoconjugates and cell wall biosynthesis using 2D LC-MS/MS.

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Proteomics and systems biology: current and future applications in the nutritional sciences

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Proteomics of industrial fungi: trends and insights for biotechnology

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Proteome analysis of the farnesol-induced stress response in Aspergillus nidulans--The role of a putative dehydrin

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Systematic functional analysis of the yeast genome

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Metabolic footprinting and systems biology: the medium is the message

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Metabolic fingerprinting as a diagnostic tool.

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Mass spectrometry in metabolome analysis.

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Metabolite profiling of fungi and yeast: from phenotype to metabolome by MS and informatics

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Identification of biomarkers for genotyping Aspergilli using non-linear methods for clustering and classification

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

It is all about metabolic fluxes

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Metabolic fluxes in riboflavin-producing Bacillus subtilis

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Determination of the fluxes in the central metabolism of Corynebacterium glutamicum by nuclear magnetic resonance spectroscopy combined with metabolite balancing.

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Network identification and flux quantification in the central metabolism of Saccharomyces cerevisiae under different conditions of glucose repression

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

The quest for the mechanisms of life

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Metabolic networks in motion: 13C-based flux analysis

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Molecular characterization of the putative transcription factor SebA involved in virulence in Aspergillus fumigatus

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Integrated analysis of the global transcriptional response to α-amylase over-production by Aspergillus oryzae

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Enhanced citrate production through gene insertion in Aspergillus niger

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Aspergillus niger genome-wide analysis reveals a large number of novel alpha-glucan acting enzymes with unexpected expression profiles

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Systemic analysis of the response of Aspergillus niger to ambient pH.

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Flux Design: In silico design of cell factories based on correlation of pathway fluxes to desired properties

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Integration of in vivo and in silico metabolic fluxes for improvement of recombinant protein production

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Effect of sexual recombination on population diversity in aflatoxin production by Aspergillus flavus and evidence for cryptic heterokaryosis

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

Isolation and NMR characterization of fumonisin B2 and a new fumonisin B6 from Aspergillus niger

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/BIOT.201200169

Proteome analysis of Aspergillus niger: lactate added in starch-containing medium can increase production of the mycotoxin fumonisin B2 by modifying acetyl-CoA metabolism

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/BIOT.201200169

Production of the polyketide 6-MSA in yeast engineered for increased malonyl-CoA supply

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/BIOT.201200169

Studies of the production of fungal polyketides in Aspergillus nidulans by using systems biology tools

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/BIOT.201200169

Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/BIOT.201200169

Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/BIOT.201200169

Aspergillus niger genomics: past, present and into the future

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/BIOT.201200169

Genome sequencing and analysis of Aspergillus oryzae

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/BIOT.201200169

Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/BIOT.201200169

Systems analysis unfolds the relationship between the phosphoketolase pathway and growth in Aspergillus nidulans

21 January 2018

1 reference

https://api.crossref.org/works/10.1002/BIOT.201200169

Metabolic control analysis. The effects of high enzyme concentrations

21 January 2018

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https://api.crossref.org/works/10.1002/BIOT.201200169

21 January 2018

Identifiers

DOI

10.1002/BIOT.201200169

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27 August 2017

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