The structural landscape of native editosomes in African trypanosomes (Q37940423)

25 August 2017

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title

The structural landscape of native editosomes in African trypanosomes (English)

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25 August 2017

author name string

Venkata Subbaraju Katari

2

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25 August 2017

Cordula Böhm

3

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25 August 2017

H. Ulrich Göringer

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC:MED AND EXT_ID:21957025

13 December 2024

language of work or name

English

1 reference

National Center for Biotechnology Information

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=21957025

13 December 2024

publication date

16 December 2010

1 reference

full work available at URL

25 August 2017

https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1002/wrna.67

1 reference

https://wires.onlinelibrary.wiley.com/doi/pdf/10.1002/wrna.67

13 December 2024

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Wiley interdisciplinary reviews. RNA

13 December 2024

published in

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25 August 2017

volume

2

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25 August 2017

issue

3

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25 August 2017

page(s)

395-407

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Major transcript of the frameshifted coxII gene from trypanosome mitochondria contains four nucleotides that are not encoded in the DNA.

25 August 2017

cites work

1 reference

RNA editing in kinetoplastids

21 January 2018

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A model for RNA editing in kinetoplastid mitochondria: "guide" RNA molecules transcribed from maxicircle DNA provide the edited information

21 January 2018

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Guide RNAs in kinetoplastid mitochondria have a nonencoded 3′ oligo(U) tail involved in recognition of the preedited region

21 January 2018

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The secondary structure of guide RNA molecules fromTrypanosoma brucei

21 January 2018

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A three-dimensional working model for a guide RNA from Trypanosoma brucei

21 January 2018

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Interactions of mRNAs and gRNAs involved in trypanosome mitochondrial RNA editing: structure probing of a gRNA bound to its cognate mRNA.

21 January 2018

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Trypanosoma brucei ATPase subunit 6 mRNA bound to gA6-14 forms a conserved three-helical structure

21 January 2018

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Uridine insertion into preedited mRNA by a mitochondrial extract from Leishmania tarentolae: stereochemical evidence for the enzyme cascade model

21 January 2018

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RNA editing: a mechanism for gRNA-specified uridylate insertion into precursor mRNA.

21 January 2018

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Alternative editing of cytochrome c oxidase III mRNA in trypanosome mitochondria generates protein diversity

21 January 2018

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Alternative RNA editing produces a novel protein involved in mitochondrial DNA maintenance in trypanosomes

21 January 2018

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Alternative mRNA editing in trypanosomes is extensive and may contribute to mitochondrial protein diversity

21 January 2018

1 reference

The formation of mitochondrial ribonucleoprotein complexes involving guide RNA molecules in Trypanosoma brucei

21 January 2018

1 reference

Different Trypanosoma brucei guide RNA molecules associate with an identical complement of mitochondrial proteins in vitro

21 January 2018

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Complexes from Trypanosoma brucei that exhibit deletion editing and other editing-associated properties

21 January 2018

1 reference

Purification of a functional enzymatic editing complex from Trypanosoma brucei mitochondria

21 January 2018

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Native gel analysis of ribonucleoprotein complexes from a Leishmania tarentolae mitochondrial extract

21 January 2018

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An essential RNase III insertion editing endonuclease in Trypanosoma brucei.

21 January 2018

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A deletion site editing endonuclease in Trypanosoma brucei.

21 January 2018

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Reconstitution of uridine-deletion precleaved RNA editing with two recombinant enzymes.

21 January 2018

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Uridylate-specific 3' 5'-exoribonucleases involved in uridylate-deletion RNA editing in trypanosomatid mitochondria.

21 January 2018

1 reference

Kinetoplastid RNA editing involves a 3' nucleotidyl phosphatase activity

21 January 2018

1 reference

TbMP42, a protein component of the RNA editing complex in African trypanosomes, has endo-exoribonuclease activity

21 January 2018

1 reference

TbMP42 is a structure-sensitive ribonuclease that likely follows a metal ion catalysis mechanism

21 January 2018

1 reference

TbMP57 is a 3' terminal uridylyl transferase (TUTase) of the Trypanosoma brucei editosome

21 January 2018

1 reference

Identification of candidate mitochondrial RNA editing ligases from Trypanosoma brucei

21 January 2018

1 reference

The two RNA ligases of the Trypanosoma brucei RNA editing complex: cloning the essential band IV gene and identifying the band V gene

21 January 2018

1 reference

Is the Trypanosoma brucei REL1 RNA ligase specific for U-deletion RNA editing, and is the REL2 RNA ligase specific for U-insertion editing?

21 January 2018

1 reference

High resolution crystal structure of a key editosome enzyme from Trypanosoma brucei: RNA editing ligase 1.

21 January 2018

1 reference

Snapshots of the RNA editing machine in trypanosomes captured at different assembly stages in vivo

21 January 2018

1 reference

Structure of the core editing complex (L-complex) involved in uridine insertion/deletion RNA editing in trypanosomatid mitochondria

21 January 2018

1 reference

Trypanosoma brucei gBP21. An arginine-rich mitochondrial protein that binds to guide RNA with high affinity

21 January 2018

1 reference

Association of guide RNA binding protein gBP21 with active RNA editing complexes in Trypanosoma brucei

21 January 2018

1 reference

Annealing of RNA editing substrates facilitated by guide RNA-binding protein gBP21

21 January 2018

1 reference

Cloning and characterization of two guide RNA-binding proteins from mitochondria of Crithidia fasciculata: gBP27, a novel protein, and gBP29, the orthologue of Trypanosoma brucei gBP21

21 January 2018

1 reference

Mechanism of the gBP21-mediated RNA/RNA annealing reaction: matchmaking and charge reduction

21 January 2018

1 reference

A 100-kD complex of two RNA-binding proteins from mitochondria of Leishmania tarentolae catalyzes RNA annealing and interacts with several RNA editing components

21 January 2018

1 reference

Trypanosoma brucei RBP16 is a mitochondrial Y-box family protein with guide RNA binding activity

21 January 2018

1 reference

RNA-binding properties of the mitochondrial Y-box protein RBP16.

21 January 2018

1 reference

Trypanosoma brucei: functions of RBP16 cold shock and RGG domains in macromolecular interactions

21 January 2018

1 reference

RBP16 is a multifunctional gene regulatory protein involved in editing and stabilization of specific mitochondrial mRNAs in Trypanosoma brucei

21 January 2018

1 reference

Trypanosoma brucei TBRGG1, a mitochondrial oligo(U)-binding protein that co-localizes with an in vitro RNA editing activity

21 January 2018

1 reference

TbRGG1, an essential protein involved in kinetoplastid RNA metabolism that is associated with a novel multiprotein complex.

21 January 2018

1 reference

Kinetoplastid RNA-editing-associated protein 1 (REAP-1): a novel editing complex protein with repetitive domains.

21 January 2018

1 reference

RNA-editing-associated protein 1 null mutant reveals link to mitochondrial RNA stability

21 January 2018

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RBP38, a novel RNA-binding protein from trypanosomatid mitochondria, modulates RNA stability

21 January 2018

1 reference

Trypanosome mitochondrial 3' terminal uridylyl transferase (TUTase): the key enzyme in U-insertion/deletion RNA editing

21 January 2018

1 reference

21 January 2018

A tale of two TUTases

1 reference

RET1-catalyzed uridylylation shapes the mitochondrial transcriptome in Trypanosoma brucei

21 January 2018

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Trypanosoma bruceimitochondria contain RNA helicase activity

21 January 2018

1 reference

Disruption of a Gene Encoding a Novel Mitochondrial DEAD-Box Protein in Trypanosoma brucei Affects Edited mRNAs

21 January 2018

1 reference

21 January 2018

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Complex management: RNA editing in trypanosomes

21 January 2018

1 reference

Guide to the nomenclature of kinetoplastid RNA editing: a proposal

21 January 2018

1 reference

Isolation of a U-insertion/deletion editing complex from Leishmania tarentolae mitochondria

21 January 2018

1 reference

A generic protein purification method for protein complex characterization and proteome exploration

21 January 2018

1 reference

GraFix: sample preparation for single-particle electron cryomicroscopy

21 January 2018

1 reference

Uridylate addition and RNA ligation contribute to the specificity of kinetoplastid insertion RNA editing

21 January 2018

1 reference

Role of uridylate-specific exoribonuclease activity in Trypanosoma brucei RNA editing

21 January 2018

1 reference

Three-dimensional reconstruction from a single-exposure, random conical tilt series applied to the 50S ribosomal subunit of Escherichia coli

21 January 2018

1 reference

A maximum-likelihood approach to single-particle image refinement.

21 January 2018

1 reference

Electron tomography of fast frozen, stretched rigor fibers reveals elastic distortions in the myosin crossbridges

21 January 2018

1 reference

Organization of core spliceosomal components U5 snRNA loop I and U4/U6 Di-snRNP within U4/U6.U5 Tri-snRNP as revealed by electron cryomicroscopy

21 January 2018

1 reference

Editing machines: the complexities of trypanosome RNA editing

21 January 2018

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Separate insertion and deletion subcomplexes of the Trypanosoma brucei RNA editing complex.

21 January 2018

1 reference

A protein-protein interaction map of trypanosome ~20S editosomes.

21 January 2018

1 reference

Dyskinetoplastic Trypanosoma brucei contains functional editing complexes

21 January 2018

1 reference

TbMP44 is essential for RNA editing and structural integrity of the editosome in Trypanosoma brucei

21 January 2018

1 reference

KREPA4, an RNA binding protein essential for editosome integrity and survival of Trypanosoma brucei

21 January 2018

1 reference

In Trypanosoma brucei RNA editing, TbMP18 (band VII) is critical for editosome integrity and for both insertional and deletional cleavages.

21 January 2018

1 reference

Compositionally and functionally distinct editosomes in Trypanosoma brucei

21 January 2018

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RNA editing in Trypanosoma brucei requires three different editosomes

21 January 2018

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The polarity of editing within a multiple gRNA-mediated domain is due to formation of anchors for upstream gRNAs by downstream editing

21 January 2018

1 reference

HYDROMIC: prediction of hydrodynamic properties of rigid macromolecular structures obtained from electron microscopy images

21 January 2018

1 reference

Interactions of mRNAs and gRNAs involved in trypanosome mitochondrial RNA editing: structure probing of an mRNA bound to its cognate gRNA.

21 January 2018

8

1 reference

RNA Editing: Transfer of Genetic Information from gRNA to Precursor mRNA in Vitro

13 December 2024

11

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Direct visualization of uridylate deletion in vitro suggests a mechanism for kinetoplastid RNA editing

13 December 2024

14

1 reference

Native mRNA editing complexes from Trypanosoma brucei mitochondria

13 December 2024

18

1 reference

RNA ligase and its involvement in guide RNA/mRNA chimera formation. Evidence for a cleavage-ligation mechanism of Trypanosoma brucei mRNA editing

13 December 2024

24

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Crystal structures of T. brucei MRP1/MRP2 guide-RNA binding complex reveal RNA matchmaking mechanism

13 December 2024

47

1 reference

RNA editing-associated protein 1 is an RNA binding protein with specificity for preedited mRNA

13 December 2024

55

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Isolation and Compositional Analysis of Trypanosomatid Editosomes

13 December 2024

66

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Uridine insertion/deletion editing activities

13 December 2024

73

1 reference

13 December 2024

Identifiers

DOI

10.1002/WRNA.67

1 reference

25 August 2017

1 reference