The Cdc48 machine in endoplasmic reticulum associated protein degradation (Q37938259)

25 August 2017

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title

The Cdc48 machine in endoplasmic reticulum associated protein degradation (English)

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25 August 2017

main subject

endoplasmic reticulum

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author name string

Alexandra Stolz

2

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25 August 2017

Dieter H. Wolf

1

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC:MED AND EXT_ID:21945179

13 December 2024

language of work or name

English

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publication date

16 September 2011

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full work available at URL

25 August 2017

https://doi.org/10.1016/j.bbamcr.2011.09.002

online access status

open access

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC:MED AND EXT_ID:21945179

https://api.elsevier.com/content/article/PII:S0167488911002606?httpAccept=text/xml

13 December 2024

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

https://api.elsevier.com/content/article/PII:S0167488911002606?httpAccept=text/plain

13 December 2024

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

Biochimica et Biophysica Acta

13 December 2024

published in

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25 August 2017

volume

1823

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25 August 2017

issue

1

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25 August 2017

page(s)

117-124

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Protein folding and misfolding

25 August 2017

cites work

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One step at a time: endoplasmic reticulum-associated degradation

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Der3p/Hrd1p Is Required for Endoplasmic Reticulum-associated Degradation of Misfolded Lumenal and Integral Membrane Proteins

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Membrane topology of the yeast endoplasmic reticulum-localized ubiquitin ligase Doa10 and comparison with its human ortholog TEB4 (MARCH-VI)

13 December 2024

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Ubiquitin ligases, critical mediators of endoplasmic reticulum-associated degradation

13 December 2024

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Ubiquitylation in the ERAD Pathway

13 December 2024

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Distinct machinery is required in Saccharomyces cerevisiae for the endoplasmic reticulum-associated degradation of a multispanning membrane protein and a soluble luminal protein

13 December 2024

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Ubiquitin ligases, critical mediators of endoplasmic reticulum-associated degradation

13 December 2024

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Sequential quality-control checkpoints triage misfolded cystic fibrosis transmembrane conductance regulator

13 December 2024

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Dissecting the ER-associated degradation of a misfolded polytopic membrane protein

13 December 2024

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A ubiquitin ligase HRD1 promotes the degradation of Pael receptor, a substrate of Parkin

13 December 2024

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https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

Misfolded membrane proteins are specifically recognized by the transmembrane domain of the Hrd1p ubiquitin ligase

13 December 2024

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Ubiquitylation in the ERAD Pathway

13 December 2024

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Role of Cue1p in Ubiquitination and Degradation at the ER Surface

13 December 2024

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ER degradation of a misfolded luminal protein by the cytosolic ubiquitin-proteasome pathway

13 December 2024

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Use of CPY and its derivatives to study protein quality control in various cell compartments

13 December 2024

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Calnexin, calreticulin and the folding of glycoproteins

13 December 2024

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Protein transport across the eukaryotic endoplasmic reticulum and bacterial inner membranes

13 December 2024

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Protein folding in a specialized compartment: the endoplasmic reticulum

13 December 2024

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Quality control in the secretory pathway

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Setting the standards: quality control in the secretory pathway

13 December 2024

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Mutant analysis links the translocon and BiP to retrograde protein transport for ER degradation

13 December 2024

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The requirement for molecular chaperones during endoplasmic reticulum-associated protein degradation demonstrates that protein export and import are mechanistically distinct

13 December 2024

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Molecular chaperones in the yeast endoplasmic reticulum maintain the solubility of proteins for retrotranslocation and degradation

13 December 2024

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13 December 2024

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13 December 2024

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Lectin chaperones help direct the maturation of glycoproteins in the endoplasmic reticulum

13 December 2024

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N-glycan structures: recognition and processing in the ER.

13 December 2024

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Role of N-linked oligosaccharide recognition, glucose trimming, and calnexin in glycoprotein folding and quality control

13 December 2024

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N-Glycosylation affects endoplasmic reticulum degradation of a mutated derivative of carboxypeptidase yscY in yeast

13 December 2024

57

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Htm1 protein generates the N-glycan signal for glycoprotein degradation in the endoplasmic reticulum

13 December 2024

58

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Defining the glycan destruction signal for endoplasmic reticulum-associated degradation

13 December 2024

59

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Mannosidase action, independent of glucose trimming, is essential for proteasome-mediated degradation of unassembled glycosylated Ig light chains

13 December 2024

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EDEM as an acceptor of terminally misfolded glycoproteins released from calnexin

13 December 2024

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Glycoprotein quality control in the endoplasmic reticulum. Mannose trimming by endoplasmic reticulum mannosidase I times the proteasomal degradation of unassembled immunoglobulin subunits

13 December 2024

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Glycopeptide specificity of the secretory protein folding sensor UDP-glucose glycoprotein:glucosyltransferase.

13 December 2024

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Minor folding defects trigger local modification of glycoproteins by the ER folding sensor GT

13 December 2024

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Exploration of the topological requirements of ERAD identifies Yos9p as a lectin sensor of misfolded glycoproteins in the ER lumen

13 December 2024

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Export of a cysteine-free misfolded secretory protein from the endoplasmic reticulum for degradation requires interaction with protein disulfide isomerase

13 December 2024

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A complex of Yos9p and the HRD ligase integrates endoplasmic reticulum quality control into the degradation machinery.

13 December 2024

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A dual task for the Xbp1-responsive OS-9 variants in the mammalian endoplasmic reticulum: inhibiting secretion of misfolded protein conformers and enhancing their disposal

13 December 2024

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OS-9 and GRP94 deliver mutant alpha1-antitrypsin to the Hrd1-SEL1L ubiquitin ligase complex for ERAD

13 December 2024

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13 December 2024

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13 December 2024

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ERdj5 is required as a disulfide reductase for degradation of misfolded proteins in the ER

13 December 2024

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ERAD and ERAD tuning: disposal of cargo and of ERAD regulators from the mammalian ER.

13 December 2024

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13 December 2024

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Sec61p is part of the endoplasmic reticulum-associated degradation machinery

13 December 2024

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Role of Sec61p in the ER-associated degradation of short-lived transmembrane proteins

13 December 2024

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A membrane protein complex mediates retro-translocation from the ER lumen into the cytosol

13 December 2024

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A membrane protein required for dislocation of misfolded proteins from the ER

13 December 2024

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Retrotranslocation of a misfolded luminal ER protein by the ubiquitin-ligase Hrd1p

13 December 2024

81

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Ubx2 links the Cdc48 complex to ER-associated protein degradation

13 December 2024

82

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Membrane-bound Ubx2 recruits Cdc48 to ubiquitin ligases and their substrates to ensure efficient ER-associated protein degradation

13 December 2024

83

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SEL1L nucleates a protein complex required for dislocation of misfolded glycoproteins

13 December 2024

84

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Characterization of erasin (UBXD2): a new ER protein that promotes ER-associated protein degradation

13 December 2024

85

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Regulation of ER-associated degradation via p97/VCP-interacting motif

13 December 2024

86

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Evolutionary divergence of valosin-containing protein/cell division cycle protein 48 binding interactions among endoplasmic reticulum-associated degradation proteins

13 December 2024

87

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Yeast cell cycle protein CDC48p shows full-length homology to the mammalian protein VCP and is a member of a protein family involved in secretion, peroxisome formation, and gene expression

13 December 2024

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Cdc48: a power machine in protein degradation

13 December 2024

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Diverse functions with a common regulator: ubiquitin takes command of an AAA ATPase

13 December 2024

91

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Complete structure of p97/valosin-containing protein reveals communication between nucleotide domains

13 December 2024

92

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https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

Structure of the AAA ATPase p97

13 December 2024

93

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https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

Going through the motions: The ATPase cycle of p97

13 December 2024

94

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https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

NSF and p97/VCP: similar at first, different at last

13 December 2024

95

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https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

Analysis of nucleotide binding to P97 reveals the properties of a tandem AAA hexameric ATPase

13 December 2024

96

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Improved structures of full-length p97, an AAA ATPase: implications for mechanisms of nucleotide-dependent conformational change

13 December 2024

97

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https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

p97: The cell's molecular purgatory?

13 December 2024

98

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https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

Central pore residues mediate the p97/VCP activity required for ERAD

13 December 2024

99

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https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

Cdc48 (p97): a "molecular gearbox" in the ubiquitin pathway?

13 December 2024

100

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

Ubiquitin receptors and ERAD: a network of pathways to the proteasome

13 December 2024

101

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https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

A series of ubiquitin binding factors connects CDC48/p97 to substrate multiubiquitylation and proteasomal targeting

13 December 2024

102

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

The otubain YOD1 is a deubiquitinating enzyme that associates with p97 to facilitate protein dislocation from the ER

13 December 2024

103

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

Enzymatic blockade of the ubiquitin-proteasome pathway

13 December 2024

104

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

Regulation of retrotranslocation by p97-associated deubiquitinating enzyme ataxin-3

13 December 2024

105

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

Ataxin-3 binds VCP/p97 and regulates retrotranslocation of ERAD substrates.

13 December 2024

106

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

Control of ubiquitin conjugation by cdc48 and its cofactors

13 December 2024

107

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https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

UBX domain proteins: major regulators of the AAA ATPase Cdc48/p97

13 December 2024

108

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https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

Insights into adaptor binding to the AAA protein p97.

13 December 2024

109

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Golgi reassembly after mitosis: the AAA family meets the ubiquitin family

13 December 2024

110

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https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

The AAA ATPase Cdc48/p97 and its partners transport proteins from the ER into the cytosol

13 December 2024

111

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

Protein dislocation from the ER requires polyubiquitination and the AAA-ATPase Cdc48.

13 December 2024

112

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

AAA-ATPase p97/Cdc48p, a cytosolic chaperone required for endoplasmic reticulum-associated protein degradation

13 December 2024

113

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

Role of the ubiquitin-selective CDC48(UFD1/NPL4 )chaperone (segregase) in ERAD of OLE1 and other substrates

13 December 2024

114

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

HRD4/NPL4 is required for the proteasomal processing of ubiquitinated ER proteins

13 December 2024

115

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

Distinct steps in dislocation of luminal endoplasmic reticulum-associated degradation substrates: roles of endoplamic reticulum-bound p97/Cdc48p and proteasome

13 December 2024

116

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

Der1p, a protein required for degradation of malfolded soluble proteins of the endoplasmic reticulum: topology and Der1-like proteins

13 December 2024

118

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

Dfm1 forms distinct complexes with Cdc48 and the ER ubiquitin ligases and is required for ERAD.

13 December 2024

119

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

Yeast Derlin Dfm1 interacts with Cdc48 and functions in ER homeostasis

13 December 2024

120

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

Function of the p97-Ufd1-Npl4 complex in retrotranslocation from the ER to the cytosol: dual recognition of nonubiquitinated polypeptide segments and polyubiquitin chains

13 December 2024

121

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

Cdc48 can distinguish between native and non-native proteins in the absence of cofactors.

13 December 2024

122

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

A genomic screen identifies Dsk2p and Rad23p as essential components of ER-associated degradation

13 December 2024

123

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

Direct binding of ubiquitin conjugates by the mammalian p97 adaptor complexes, p47 and Ufd1-Npl4.

13 December 2024

124

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

The AAA ATPase p97/VCP interacts with its alternative co-factors, Ufd1-Npl4 and p47, through a common bipartite binding mechanism

13 December 2024

125

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https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

Structural insights into the p97-Ufd1-Npl4 complex.

13 December 2024

126

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

Ubx4 modulates cdc48 activity and influences degradation of misfolded proteins of the endoplasmic reticulum

13 December 2024

127

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https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

Global landscape of protein complexes in the yeast Saccharomyces cerevisiae

13 December 2024

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A stress-responsive system for mitochondrial protein degradation

13 December 2024

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A Cdc48p-associated Factor Modulates Endoplasmic Reticulum-associated Degradation, Cell Stress, and Ubiquitinated Protein Homeostasis

13 December 2024

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1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

Sec61-mediated transfer of a membrane protein from the endoplasmic reticulum to the proteasome for destruction

13 December 2024

131

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

The p97 ATPase dislocates MHC class I heavy chain in US2-expressing cells via a Ufd1-Npl4-independent mechanism

13 December 2024

132

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

The human cytomegalovirus US11 gene product dislocates MHC class I heavy chains from the endoplasmic reticulum to the cytosol

13 December 2024

133

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

The TRC8 E3 ligase ubiquitinates MHC class I molecules before dislocation from the ER

13 December 2024

134

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

Different p97/VCP complexes function in retrotranslocation step of mammalian ER-associated degradation (ERAD).

13 December 2024

135

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

PNG1, a yeast gene encoding a highly conserved peptide:N-glycanase

13 December 2024

136

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

Rad23 provides a link between the Png1 deglycosylating enzyme and the 26 S proteasome in yeast.

13 December 2024

137

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

The PUB domain: a putative protein-protein interaction domain implicated in the ubiquitin-proteasome pathway

13 December 2024

138

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

The AAA ATPase p97 links peptide N-glycanase to the endoplasmic reticulum-associated E3 ligase autocrine motility factor receptor

13 December 2024

139

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

The PUB domain functions as a p97 binding module in human peptide N-glycanase

13 December 2024

140

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

Studies on peptide:N-glycanase-p97 interaction suggest that p97 phosphorylation modulates endoplasmic reticulum-associated degradation

13 December 2024

141

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

Tyrosine phosphorylation of ATPase p97 regulates its activity during ERAD.

13 December 2024

142

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

Diverse functions with a common regulator: ubiquitin takes command of an AAA ATPase

13 December 2024

144

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

Role(s) of Cdc48/p97 in mitosis.

13 December 2024

145

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

The complexities of p97 function in health and disease

13 December 2024

146

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

Control of ubiquitin conjugation by cdc48 and its cofactors

13 December 2024

147

1 reference

https://api.crossref.org/works/10.1016/J.BBAMCR.2011.09.002

13 December 2024

Identifiers

1 reference

release_o2eiiygxlje3bbipmksej2z2v4

25 August 2017

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/o2eiiygxlje3bbipmksej2z2v4

mapped directly with Wikidata item

24 November 2022

based on heuristic

1 reference