Development of Bioinformatics Infrastructure for Genomics Research in H3Africa. (Q37834689)

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6 April 2020

title

Development of Bioinformatics Infrastructure for Genomics Research (English)

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6 April 2020

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6 April 2020

Nicola Mulder

1

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6 April 2020

Seun Adeyemi

4

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6 April 2020

Bola Akanle

7

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6 April 2020

Mohamed Alibi

8

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6 April 2020

Shakuntala Baichoo

12

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6 April 2020

Faisal M Fadlelmola

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6 April 2020

Scott Hazelhurst

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6 April 2020

Itunuoluwa Isewon

22

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6 April 2020

Abayomi Mosaku

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6 April 2020

Ahmed Moussa

30

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6 April 2020

Zahra Mungloo-Dilmohamud

32

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6 April 2020

Trust Odia

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6 April 2020

Jelili Oyelade

38

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6 April 2020

Samson P Salifu

40

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6 April 2020

Jumoke Soyemi

41

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6 April 2020

37

Victor Osamor

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6 April 2020

author name string

Ezekiel Adebiyi

2

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6 April 2020

Marion Adebiyi

3

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6 April 2020

Rehab Ahmed

6

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6 April 2020

Don L Armstrong

9

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6 April 2020

Shaun Aron

10

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6 April 2020

Efejiro Ashano

11

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6 April 2020

Alia Benkahla

13

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6 April 2020

David K Brown

14

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6 April 2020

Emile R Chimusa

15

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6 April 2020

Dare Falola

17

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6 April 2020

Segun Fatumo

18

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6 April 2020

Kais Ghedira

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6 April 2020

Amel Ghouila

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6 April 2020

Segun Jung

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6 April 2020

Jonathan K Kayondo

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6 April 2020

Mamana Mbiyavanga

26

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6 April 2020

Ayton Meintjes

27

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6 April 2020

Somia Mohammed

28

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6 April 2020

Mustafa Muhammd

31

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6 April 2020

Oyekanmi Nashiru

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6 April 2020

Adaobi Okafor

35

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6 April 2020

Olaleye Oladipo

36

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6 April 2020

Khalid Sadki

39

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6 April 2020

Sumir Panji

42

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6 April 2020

Fouzia Radouani

43

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6 April 2020

Oussama Souiai

44

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6 April 2020

H3ABioNet Consortium, as members of the H3Africa Consortium

46

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6 April 2020

Azza Ahmed

5

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6 April 2020

Samar Kamal Kassim

24

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6 April 2020

publication date

13 March 2017

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6 April 2020

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6 April 2020

volume

12

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6 April 2020

issue

2

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6 April 2020

page(s)

91-98

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Proceedings of a Sickle Cell Disease Ontology workshop - Towards the first comprehensive ontology for Sickle Cell Disease

6 April 2020

cites work

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The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update

23 June 2018

1 reference

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The real cost of sequencing: scaling computation to keep pace with data generation

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582980

H3ABioNet, a sustainable pan-African bioinformatics network for human heredity and health in Africa

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582980

ancGWAS: a post genome-wide association study method for interaction, pathway and ancestry analysis in homogeneous and admixed populations

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582980

JMS: An Open Source Workflow Management System and Web-Based Cluster Front-End for High Performance Computing

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582980

The European Genome-phenome Archive of human data consented for biomedical research.

23 June 2018

1 reference

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A genomic portrait of haplotype diversity and signatures of selection in indigenous southern African populations

23 June 2018

1 reference

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Genenames.org: the HGNC resources in 2015

23 June 2018

1 reference

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UniProt: a hub for protein information

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582980

Bioinformatics education--perspectives and challenges out of Africa

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582980

Research capacity. Enabling the genomic revolution in Africa

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582980

WebProtégé: a collaborative Web-based platform for editing biomedical ontologies

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582980

ClinVar: public archive of relationships among sequence variation and human phenotype

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582980

Determining ancestry proportions in complex admixture scenarios in South Africa using a novel proxy ancestry selection method

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582980

Predicting functional effect of human missense mutations using PolyPhen-2.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582980

Predicting the functional effect of amino acid substitutions and indels

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582980

Predicting the functional, molecular, and phenotypic consequences of amino acid substitutions using hidden Markov models

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582980

Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582980

A linear complexity phasing method for thousands of genomes

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582980

A flexible and accurate genotype imputation method for the next generation of genome-wide association studies

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582980

Research electronic data capture (REDCap)--a metadata-driven methodology and workflow process for providing translational research informatics support

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582980

African genetic diversity: implications for human demographic history, modern human origins, and complex disease mapping

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582980

Predicting the insurgence of human genetic diseases associated to single point protein mutations with support vector machines and evolutionary information

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582980

The Ensembl genome database project

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582980

dbSNP: the NCBI database of genetic variation

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582980

Online Mendelian Inheritance in Man (OMIM).

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582980

23 June 2018

The Protein Data Bank

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582980

AUTO-MUTE: web-based tools for predicting stability changes in proteins due to single amino acid replacements.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582980

Prediction of protein stability changes for single-site mutations using support vector machines

1 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5582980

10.1016/J.GHEART.2017.01.005

1 September 2018

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:28302555 AND SRC:MED&resulttype=core&format=json

6 April 2020

1 reference

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6 April 2020

PubMed publication ID

28302555

1 reference