A system for enhancing genome-wide coexpression dynamics study. (Q37595558)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15492223 AND SRC:MED&resulttype=core&format=json

4 January 2020

title

A system for enhancing genome-wide coexpression dynamics study (English)

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4 January 2020

2

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4 January 2020

author name string

Ker-Chau Li

1

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4 January 2020

Wei Sun

3

1 reference

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4 January 2020

Shinsheng Yuan

4

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4 January 2020

Tianwei Yu

5

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4 January 2020

language of work or name

English

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publication date

18 October 2004

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Proceedings of the National Academy of Sciences of the United States of America

4 January 2020

published in

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4 January 2020

volume

101

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4 January 2020

issue

44

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4 January 2020

page(s)

15561-15566

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15492223 AND SRC:MED&resulttype=core&format=json

Sfi1p has conserved centrin-binding sites and an essential function in budding yeast spindle pole body duplication

4 January 2020

cites work

1 reference

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Sequence-structure-function relationships of Tgs1, the yeast snRNA/snoRNA cap hypermethylase

23 August 2017

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Apolipoprotein D levels are elevated in prefrontal cortex of subjects with Alzheimer's disease: no relation to apolipoprotein E expression or genotype

23 August 2017

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The yeast eukaryotic initiation factor 4G (eIF4G) HEAT domain interacts with eIF1 and eIF5 and is involved in stringent AUG selection

23 August 2017

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GSK-3alpha regulates production of Alzheimer's disease amyloid-beta peptides

23 August 2017

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RRP20, a component of the 90S preribosome, is required for pre-18S rRNA processing in Saccharomyces cerevisiae

23 August 2017

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Self-association of the spindle pole body-related intermediate filament protein Fin1p and its phosphorylation-dependent interaction with 14-3-3 proteins in yeast

23 August 2017

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Putative function of ADAM9, ADAM10, and ADAM17 as APP alpha-secretase

23 August 2017

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Genome-wide coexpression dynamics: theory and application

23 August 2017

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Nnf1p, Dsn1p, Mtw1p, and Nsl1p: a new group of proteins important for chromosome segregation in Saccharomyces cerevisiae

23 August 2017

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Transitive functional annotation by shortest-path analysis of gene expression data

23 August 2017

1 reference

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A new functional screening system for identification of regulators for the generation of amyloid beta-protein

23 August 2017

1 reference

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SWI/SNF complex interacts with tumor suppressor p53 and is necessary for the activation of p53-mediated transcription

23 August 2017

1 reference

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Genetic dissection of transcriptional regulation in budding yeast

23 August 2017

1 reference

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The human programmed cell death-2 (PDCD2) gene is a target of BCL6 repression: implications for a role of BCL6 in the down-regulation of apoptosis

23 August 2017

1 reference

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Functional significance and mechanism of eIF5-promoted GTP hydrolysis in eukaryotic translation initiation

23 August 2017

1 reference

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Chemosensitivity prediction by transcriptional profiling

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=524832

Caveolin-1 expression negatively regulates cell cycle progression by inducing G(0)/G(1) arrest via a p53/p21(WAF1/Cip1)-dependent mechanism.

23 August 2017

1 reference

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Repression of rRNA synthesis due to a secretory defect requires the C-terminal silencing domain of Rap1p in Saccharomyces cerevisiae

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=524832

Promoter-specific binding of Rap1 revealed by genome-wide maps of protein-DNA association

23 August 2017

1 reference

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A transcriptionally [correction of transcriptively] active complex of APP with Fe65 and histone acetyltransferase Tip60

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=524832

Alzheimer's disease: genes, proteins, and therapy

23 August 2017

1 reference

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Biochemical analysis of the eIF2beta gamma complex reveals a structural function for eIF2alpha in catalyzed nucleotide exchange

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=524832

Singular value decomposition for genome-wide expression data processing and modeling

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=524832

A gene expression database for the molecular pharmacology of cancer

23 August 2017

1 reference

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Systematic variation in gene expression patterns in human cancer cell lines

23 August 2017

1 reference

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A combined algorithm for genome-wide prediction of protein function

23 August 2017

1 reference

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Interaction of the metalloprotease disintegrins MDC9 and MDC15 with two SH3 domain-containing proteins, endophilin I and SH3PX1

23 August 2017

1 reference

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Yeast epsins contain an essential N-terminal ENTH domain, bind clathrin and are required for endocytosis

23 August 2017

1 reference

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Interpreting patterns of gene expression with self-organizing maps: methods and application to hematopoietic differentiation

23 August 2017

1 reference

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Cluster analysis and display of genome-wide expression patterns

23 August 2017

1 reference

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Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization

23 August 2017

1 reference

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Cooperative modulation by eIF4G of eIF4E-binding to the mRNA 5' cap in yeast involves a site partially shared by p20.

23 August 2017

1 reference

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Requirement of mismatch repair genes MSH2 and MSH3 in the RAD1-RAD10 pathway of mitotic recombination in Saccharomyces cerevisiae.

23 August 2017

1 reference

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Continued functioning of the secretory pathway is essential for ribosome synthesis

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=524832

Transcriptional repressor BCL-6 immortalizes germinal center-like B cells in the absence of p53 function

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=524832

The XMAP215 homologue Stu2 at yeast spindle pole bodies regulates microtubule dynamics and anchorage

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=524832

The CBP/p300 TAZ1 domain in its native state is not a binding partner of MDM2.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=524832

A functional genomic study on NCI's anticancer drug screen

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=524832

Neu differentiation factor (Heregulin) activates a p53-dependent pathway in cancer cells

25 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=524832

Modulation of eukaryotic mRNA stability via the cap-binding translation complex eIF4F.

25 June 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.0402962101

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.0402962101

Signal transduction through tyrosine-phosphorylated C-terminal fragments of amyloid precursor protein via an enhanced interaction with Shc/Grb2 adaptor proteins in reactive astrocytes of Alzheimer's disease brain.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.0402962101

Apolipoprotein D levels are elevated in prefrontal cortex of subjects with Alzheimer’s disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.0402962101

Estimation of the Mean of a Multivariate Normal Distribution

21 January 2018

1 reference

https://api.crossref.org/works/10.1073/PNAS.0402962101

21 January 2018

Identifiers

DOI

10.1073/PNAS.0402962101

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15492223 AND SRC:MED&resulttype=core&format=json

4 January 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15492223 AND SRC:MED&resulttype=core&format=json

4 January 2020

PubMed publication ID

15492223

1 reference