Quantitative approaches in developmental biology. (Q37544246)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19584811 AND SRC:MED&resulttype=core&format=json

2 February 2020

review article

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title

Quantitative approaches in developmental biology (English)

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19584811 AND SRC:MED&resulttype=core&format=json

2 February 2020

main subject

developmental biology

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2

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2 February 2020

Carl-Philipp Heisenberg

series ordinal

4

object named as

Carl-Philipp Heisenberg

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2 February 2020

author name string

Andrew C Oates

series ordinal

1

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2 February 2020

Marcos González-Gaitán

series ordinal

3

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2 February 2020

publication date

1 August 2009

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2 February 2020

published in

Nature Reviews Genetics

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2 February 2020

volume

10

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19584811 AND SRC:MED&resulttype=core&format=json

2 February 2020

issue

8

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19584811 AND SRC:MED&resulttype=core&format=json

2 February 2020

page(s)

517-530

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Establishment of developmental precision and proportions in the early Drosophila embryo

2 February 2020

cites work

1 reference

Precise domain specification in the developing Drosophila embryo.

21 January 2018

1 reference

Morphogen transport in epithelia.

21 January 2018

1 reference

Mathematical modeling of planar cell polarity to understand domineering nonautonomy.

21 January 2018

1 reference

The emergence of geometric order in proliferating metazoan epithelia

31 March 2020

1 reference

An auxin-driven polarized transport model for phyllotaxis

31 March 2020

1 reference

From signals to patterns: space, time, and mathematics in developmental biology

31 March 2020

1 reference

Biology by numbers: mathematical modelling in developmental biology.

31 March 2020

1 reference

Quantitative models of developmental pattern formation

31 March 2020

1 reference

Quantification and variation in experimental studies of morphogenesis

31 March 2020

1 reference

The chemical basis of morphogenesis

31 March 2020

1 reference

Positional information and the spatial pattern of cellular differentiation

31 March 2020

1 reference

The bicoid protein determines position in the Drosophila embryo in a concentration-dependent manner

31 March 2020

1 reference

Activin signalling and response to a morphogen gradient.

31 March 2020

1 reference

Morphogens, their identification and regulation

31 March 2020

1 reference

Robustness of the BMP morphogen gradient in Drosophila embryonic patterning.

31 March 2020

1 reference

Probing the limits to positional information

31 March 2020

1 reference

On the mechanism of wing size determination in fly development

31 March 2020

1 reference

Kinetics of morphogen gradient formation.

31 March 2020

1 reference

Gradient formation of the TGF-beta homolog Dpp.

31 March 2020

1 reference

Stability and nuclear dynamics of the bicoid morphogen gradient

31 March 2020

1 reference

Do morphogen gradients arise by diffusion?

31 March 2020

1 reference

Cytonemes: cellular processes that project to the principal signaling center in Drosophila imaginal discs

31 March 2020

1 reference

Wingless gradient formation in the Drosophila wing

31 March 2020

1 reference

Three Drosophila EXT genes shape morphogen gradients through synthesis of heparan sulfate proteoglycans

31 March 2020

1 reference

Dpp gradient formation by dynamin-dependent endocytosis: receptor trafficking and the diffusion model.

31 March 2020

1 reference

Drosophila Dpp morphogen movement is independent of dynamin-mediated endocytosis but regulated by the glypican members of heparan sulfate proteoglycans.

31 March 2020

1 reference

Physics of chemoreception

31 March 2020

1 reference

Precision of the Dpp gradient

31 March 2020

1 reference

Diffusion and scaling during early embryonic pattern formation

31 March 2020

1 reference

Formation of the bicoid morphogen gradient: an mRNA gradient dictates the protein gradient

31 March 2020

1 reference

Dynamical analysis of regulatory interactions in the gap gene system of Drosophila melanogaster

31 March 2020

1 reference

On the dynamic nature of positional information

31 March 2020

1 reference

Known maternal gradients are not sufficient for the establishment of gap domains in Drosophila melanogaster

31 March 2020

1 reference

Specifying positional information in the embryo: looking beyond morphogens.

31 March 2020

1 reference

Pre-steady-state decoding of the Bicoid morphogen gradient

31 March 2020

1 reference

Re-examining the stability of the Bicoid morphogen gradient.

31 March 2020

1 reference

The interpretation of position in a morphogen gradient as revealed by occupancy of activin receptors

31 March 2020

1 reference

Mechanical control of tissue morphogenesis during embryological development

31 March 2020

1 reference

The forces that shape embryos: physical aspects of convergent extension by cell intercalation

31 March 2020

1 reference

Cell surface mechanics and the control of cell shape, tissue patterns and morphogenesis.

31 March 2020

1 reference

Geometric control of cell life and death

31 March 2020

1 reference

Engineering cell shape and function

31 March 2020

1 reference

Cell shape, cytoskeletal tension, and RhoA regulate stem cell lineage commitment

31 March 2020

1 reference

Matrix elasticity directs stem cell lineage specification

31 March 2020

1 reference

Mechanical control of cyclic AMP signalling and gene transcription through integrins

31 March 2020

1 reference

Demonstration of mechanical connections between integrins, cytoskeletal filaments, and nucleoplasm that stabilize nuclear structure

31 March 2020

1 reference

Emergent patterns of growth controlled by multicellular form and mechanics

31 March 2020

1 reference

Cells lying on a bed of microneedles: an approach to isolate mechanical force

31 March 2020

1 reference

Tissue deformation modulates twist expression to determine anterior midgut differentiation in Drosophila embryos.

31 March 2020

1 reference

Mechanical induction of Twist in the Drosophila foregut/stomodeal primordium

31 March 2020

1 reference

Cellular mechanotransduction: putting all the pieces together again

31 March 2020

1 reference

A computational tensegrity model predicts dynamic rheological behaviors in living cells

31 March 2020

1 reference

Reconstruction of tissues by dissociated cells. Some morphogenetic tissue movements and the sorting out of embryonic cells may have a common explanation

31 March 2020

1 reference

Liquid properties of embryonic tissues: Measurement of interfacial tensions

31 March 2020

1 reference

The differential adhesion hypothesis: a direct evaluation

31 March 2020

1 reference

Differential adhesion in morphogenesis: a modern view

31 March 2020

1 reference

Tensile forces govern germ-layer organization in zebrafish.

31 March 2020

1 reference

Epithelial coating controls mesenchymal shape change through tissue-positioning effects and reduction of surface-minimizing tension.

31 March 2020

1 reference

Physical modeling of cell geometric order in an epithelial tissue

31 March 2020

1 reference

Cell adhesion and cortex contractility determine cell patterning in the Drosophila retina.

31 March 2020

1 reference

The influence of cell mechanics, cell-cell interactions, and proliferation on epithelial packing

31 March 2020

1 reference

Shaping the zebrafish notochord

31 March 2020

1 reference

Mechanisms of convergence and extension by cell intercalation

31 March 2020

1 reference

Myosin-dependent junction remodelling controls planar cell intercalation and axis elongation

31 March 2020

1 reference

Multicellular rosette formation links planar cell polarity to tissue morphogenesis

31 March 2020

1 reference

Hexagonal packing of Drosophila wing epithelial cells by the planar cell polarity pathway

31 March 2020

1 reference

Nature and anisotropy of cortical forces orienting Drosophila tissue morphogenesis

31 March 2020

1 reference

Model of convergent extension in animal morphogenesis

31 March 2020

1 reference

A putative catenin-cadherin system mediates morphogenesis of the Caenorhabditis elegans embryo

31 March 2020

1 reference

folded gastrulation, cell shape change and the control of myosin localization.

31 March 2020

1 reference

Shroom induces apical constriction and is required for hingepoint formation during neural tube closure

31 March 2020

1 reference

Control of Drosophila gastrulation by apical localization of adherens junctions and RhoGEF2.

31 March 2020

1 reference

Measurements of mechanical properties of the blastula wall reveal which hypothesized mechanisms of primary invagination are physically plausible in the sea urchin Strongylocentrotus purpuratus

31 March 2020

1 reference

The mechanical basis of morphogenesis. I. Epithelial folding and invagination.

31 March 2020

1 reference

Hydrodynamic simulation of multicellular embryo invagination.

31 March 2020

1 reference

Pulsed contractions of an actin-myosin network drive apical constriction

31 March 2020

1 reference

Tissue tectonics: morphogenetic strain rates, cell shape change and intercalation

31 March 2020

1 reference

Mechanical control of global cell behaviour during dorsal closure in Drosophila

31 March 2020

1 reference

Dynamic analyses of Drosophila gastrulation provide insights into collective cell migration

31 March 2020

1 reference

Measurement of in vivo stress resultants in neurulation-stage amphibian embryos.

31 March 2020

1 reference

Actomyosin stiffens the vertebrate embryo during crucial stages of elongation and neural tube closure.

31 March 2020

1 reference

Forces for morphogenesis investigated with laser microsurgery and quantitative modeling

31 March 2020

1 reference

Multiple forces contribute to cell sheet morphogenesis for dorsal closure in Drosophila.

31 March 2020

1 reference

Upregulation of forces and morphogenic asymmetries in dorsal closure during Drosophila development

31 March 2020

1 reference

Segmental patterning of the vertebrate embryonic axis

31 March 2020

1 reference

Control of segment number in vertebrate embryos

31 March 2020

1 reference

Dynamics of zebrafish somitogenesis

31 March 2020

1 reference

A clock and wavefront model for control of the number of repeated structures during animal morphogenesis

31 March 2020

1 reference

Sharp developmental thresholds defined through bistability by antagonistic gradients of retinoic acid and FGF signaling

31 March 2020

1 reference

Avian hairy gene expression identifies a molecular clock linked to vertebrate segmentation and somitogenesis

31 March 2020

1 reference

Oscillatory expression of the bHLH factor Hes1 regulated by a negative feedback loop

31 March 2020

1 reference

Real-time imaging of the somite segmentation clock: revelation of unstable oscillators in the individual presomitic mesoderm cells

31 March 2020

1 reference

Autoinhibition with transcriptional delay: a simple mechanism for the zebrafish somitogenesis oscillator.

31 March 2020

1 reference

Oscillatory expression of Hes1, p53, and NF-kappaB driven by transcriptional time delays

31 March 2020

1 reference

Sustained oscillations and time delays in gene expression of protein Hes1

31 March 2020

1 reference

Instability of Hes7 protein is crucial for the somite segmentation clock

31 March 2020

1 reference

Setting the tempo in development: an investigation of the zebrafish somite clock mechanism

31 March 2020

1 reference

A cellular oscillator model for periodic pattern formation.

31 March 2020

1 reference

Segmentation and somitogenesis derived from phase dynamics in growing oscillatory media.

31 March 2020

1 reference

Noise-resistant and synchronized oscillation of the segmentation clock.

31 March 2020

1 reference

Notch signalling and the synchronization of the somite segmentation clock

31 March 2020

1 reference

Notch signalling synchronizes the zebrafish segmentation clock but is not needed to create somite boundaries

31 March 2020

1 reference

Synchrony dynamics during initiation, failure, and rescue of the segmentation clock.

31 March 2020

1 reference

A β-catenin gradient links the clock and wavefront systems in mouse embryo segmentation

31 March 2020

1 reference

Delayed coupling theory of vertebrate segmentation

31 March 2020

1 reference

Modeling the heart--from genes to cells to the whole organ

31 March 2020

1 reference

Linking a genetic defect to its cellular phenotype in a cardiac arrhythmia

31 March 2020

1 reference

Cardiac mechano-electric feedback: past, present, and prospect

31 March 2020

1 reference

A dynamic fate map of the forebrain shows how vertebrate eyes form and explains two causes of cyclopia

31 March 2020

1 reference

Reconstruction of zebrafish early embryonic development by scanned light sheet microscopy

31 March 2020

1 reference

Cell movement during chick primitive streak formation

31 March 2020

1 reference

Grid-free models of multicellular systems, with an application to large-scale vortices accompanying primitive streak formation

31 March 2020

1 reference

The amniote primitive streak is defined by epithelial cell intercalation before gastrulation.

31 March 2020

1 reference

Formation of the chick primitive streak as studied in computer simulations

31 March 2020

1 reference

Modeling the bicoid gradient: diffusion and reversible nuclear trapping of a stable protein

31 March 2020

1 reference

Simulation of biological cell sorting using a two-dimensional extended Potts model

31 March 2020

1 reference

Surface tensions of embryonic tissues predict their mutual envelopment behavior.

31 March 2020

1 reference

12 December 2020

Cell shape changes indicate a role for extrinsic tensile forces in Drosophila germ-band extension.

1 reference

12 December 2020

Simulation of the differential adhesion driven rearrangement of biological cells

1 reference

12 December 2020

A changing morphogen gradient is interpreted by continuous transduction flow.

1 reference

12 December 2020

How do sea urchins invaginate? Using biomechanics to distinguish between mechanisms of primary invagination

1 reference

12 December 2020

Cell motility driving mediolateral intercalation in explants of Xenopus laevis

1 reference

12 December 2020