Nuance in the double-helix and its role in protein-DNA recognition. (Q37442208)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19362815 AND SRC:MED&resulttype=core&format=json

25 January 2020

review article

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title

Nuance in the double-helix and its role in protein-DNA recognition (English)

1 reference

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25 January 2020

2

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25 January 2020

author name string

Remo Rohs

series ordinal

1

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25 January 2020

Peng Liu

series ordinal

3

1 reference

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25 January 2020

Barry Honig

series ordinal

4

1 reference

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25 January 2020

publication date

10 April 2009

1 reference

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Current Opinion in Structural Biology

25 January 2020

published in

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19362815 AND SRC:MED&resulttype=core&format=json

25 January 2020

volume

19

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25 January 2020

issue

2

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19362815 AND SRC:MED&resulttype=core&format=json

25 January 2020

page(s)

171-177

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19362815 AND SRC:MED&resulttype=core&format=json

Predicting transcription factor specificity with all-atom models

25 January 2020

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Role of histone tails in chromatin folding revealed by a mesoscopic oligonucleosome model

23 August 2017

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NMR structural and kinetic characterization of a homeodomain diffusing and hopping on nonspecific DNA.

23 August 2017

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A genomic code for nucleosome positioning

23 August 2017

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Modeling the Lac repressor-operator assembly: the influence of DNA looping on Lac repressor conformation

23 August 2017

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23 August 2017

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Molecular flexibility in ab initio drug docking to DNA: binding-site and binding-mode transitions in all-atom Monte Carlo simulations

23 August 2017

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Protein-DNA binding specificity predictions with structural models

23 August 2017

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Molecular dynamics simulations of the 136 unique tetranucleotide sequences of DNA oligonucleotides. II: sequence context effects on the dynamical structures of the 10 unique dinucleotide steps

23 August 2017

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Protein-DNA recognition patterns and predictions.

23 August 2017

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Comparison of the protein-protein interfaces in the p53-DNA crystal structures: towards elucidation of the biological interface

23 August 2017

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23 August 2017

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23 August 2017

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Overall structure and sugar dynamics of a DNA dodecamer from homo- and heteronuclear dipolar couplings and 31P chemical shift anisotropy

23 August 2017

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Rapid grid-based construction of the molecular surface and the use of induced surface charge to calculate reaction field energies: applications to the molecular systems and geometric objects

23 August 2017

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DNA bending by an adenine-thymine tract and its role in gene regulation

23 August 2017

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DNA sequence-dependent deformability deduced from protein-DNA crystal complexes

23 August 2017

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23 August 2017

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23 August 2017

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23 August 2017

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26 June 2018

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26 June 2018

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26 June 2018

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2 September 2018

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2 September 2018

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Structural basis for p53 binding-induced DNA bending

2 September 2018

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Kinking occurs during molecular dynamics simulations of small DNA minicircles

2 September 2018

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Structural basis of DNA recognition by p53 tetramers.

2 September 2018

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Molecular dynamics simulations of DNA with polarizable force fields: convergence of an ideal B-DNA structure to the crystallographic structure

2 September 2018

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Structural and energetic origins of sequence-specific DNA bending: Monte Carlo simulations of papillomavirus E2-DNA binding sites

2 September 2018

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2 September 2018

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2 September 2018

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2 September 2018

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2 September 2018

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12 December 2020

Role of inter and intramolecular interactions in protein-DNA recognition

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12 December 2020

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B-DNA twisting correlates with base-pair morphology.

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Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19362815 AND SRC:MED&resulttype=core&format=json

25 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19362815 AND SRC:MED&resulttype=core&format=json

25 January 2020

PubMed publication ID

19362815

1 reference