The binding sites for the chromatin insulator protein CTCF map to DNA methylation-free domains genome-wide (Q37389164)

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30 December 2019

title

The binding sites for the chromatin insulator protein CTCF map to DNA methylation-free domains genome-wide (English)

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30 December 2019

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3

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30 December 2019

Svetlana D. Pack

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30 December 2019

author name string

Rituparna Mukhopadhyay

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30 December 2019

WenQiang Yu

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30 December 2019

JunWang Xu

4

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30 December 2019

Magda Lezcano

5

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30 December 2019

Chandrasekhar Kanduri

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Meena Kanduri

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30 December 2019

Vasudeva Ginjala

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Alexander Vostrov

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30 December 2019

Wolfgang Quitschke

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30 December 2019

Igor Chernukhin

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Elena Klenova

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Victor Lobanenkov

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Rolf Ohlsson

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30 December 2019

language of work or name

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15 July 2004

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30 December 2019

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volume

14

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30 December 2019

issue

8

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30 December 2019

page(s)

1863-1602

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Mutation of a single CTCF target site within the H19 imprinting control region leads to loss of Igf2 imprinting and complex patterns of de novo methylation upon maternal inheritance.

30 December 2019

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=509268

EICO (Expression-based Imprint Candidate Organizer): finding disease-related imprinted genes

6 September 2017

1 reference

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Association of Lsh, a regulator of DNA methylation, with pericentromeric heterochromatin is dependent on intact heterochromatin

6 September 2017

1 reference

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The nucleotides responsible for the direct physical contact between the chromatin insulator protein CTCF and the H19 imprinting control region manifest parent of origin-specific long-distance insulation and methylation-free domains

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=509268

Initial sequencing and comparative analysis of the mouse genome

6 September 2017

1 reference

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CTCF maintains differential methylation at the Igf2/H19 locus

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=509268

The novel BORIS CTCF gene family is uniquely involved in the epigenetics of normal biology and cancer

6 September 2017

1 reference

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BORIS, a novel male germ-line-specific protein associated with epigenetic reprogramming events, shares the same 11-zinc-finger domain with CTCF, the insulator protein involved in reading imprinting marks in the soma

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=509268

CTCF is a uniquely versatile transcription regulator linked to epigenetics and disease

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=509268

Functional phosphorylation sites in the C-terminal region of the multivalent multifunctional transcriptional factor CTCF

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=509268

Insulators and boundaries: versatile regulatory elements in the eukaryotic genome

6 September 2017

1 reference

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Methyl-CpG-binding proteins. Targeting specific gene repression.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=509268

Differential effect of zinc finger deletions on the binding of CTCF to the promoter of the amyloid precursor protein gene

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=509268

CTCF mediates methylation-sensitive enhancer-blocking activity at the H19/Igf2 locus

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=509268

Methylation of a CTCF-dependent boundary controls imprinted expression of the Igf2 gene

6 September 2017

1 reference

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Gene ontology: tool for the unification of biology

6 September 2017

1 reference

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In vivo cross-linking and immunoprecipitation for studying dynamic Protein:DNA associations in a chromatin environment

6 September 2017

1 reference

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An exceptionally conserved transcriptional repressor, CTCF, employs different combinations of zinc fingers to bind diverged promoter sequences of avian and mammalian c-myc oncogenes

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=509268

Identification of a nonhistone chromosomal protein associated with heterochromatin in Drosophila melanogaster and its gene

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=509268

A differentially methylated imprinting control region within the Kcnq1 locus harbors a methylation-sensitive chromatin insulator

6 September 2017

1 reference

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CpG methylation regulates the Igf2/H19 insulator

28 September 2017

1 reference

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The 5' flank of mouse H19 in an unusual chromatin conformation unidirectionally blocks enhancer-promoter communication

28 September 2017

1 reference

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Functional association of CTCF with the insulator upstream of the H19 gene is parent of origin-specific and methylation-sensitive

28 September 2017

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15256511

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1101/GR.2408304

1 reference

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30 December 2019

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30 December 2019

PubMed publication ID

15256511

1 reference