Detecting HIV-1 integration by repetitive-sampling Alu-gag PCR. (Q37386023)

20 August 2017

1 reference

title

Detecting HIV-1 integration by repetitive-sampling Alu-gag PCR. (English)

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20 August 2017

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Megan K Liszewski

1

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20 August 2017

Jianqing J Yu

series ordinal

2

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20 August 2017

Una O'Doherty

series ordinal

3

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20 August 2017

3 February 2009

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20 August 2017

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20 August 2017

47

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20 August 2017

4

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20 August 2017

254-260

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Global analysis of host-pathogen interactions that regulate early-stage HIV-1 replication

20 August 2017

1 reference

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A more precise HIV integration assay designed to detect small differences finds lower levels of integrated DNA in HAART treated patients

6 September 2017

1 reference

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Viral reservoirs, residual viremia, and the potential of highly active antiretroviral therapy to eradicate HIV infection.

6 September 2017

1 reference

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Identification of host proteins required for HIV infection through a functional genomic screen

6 September 2017

1 reference

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Immediate activation fails to rescue efficient human immunodeficiency virus replication in quiescent CD4 T cells

6 September 2017

1 reference

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Experimental approaches to the study of HIV-1 latency

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2862469

Human immunodeficiency virus type 1 can establish latent infection in resting CD4 T cells in the absence of activating stimuli

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2862469

Depletion of latent HIV-1 infection in vivo: a proof-of-concept study

6 September 2017

1 reference

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Multiple, linked human immunodeficiency virus type 1 drug resistance mutations in treatment-experienced patients are missed by standard genotype analysis

6 September 2017

1 reference

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New real-time reverse transcriptase-initiated PCR assay with single-copy sensitivity for human immunodeficiency virus type 1 RNA in plasma

6 September 2017

1 reference

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Virology. Weapons of mutational destruction

6 September 2017

1 reference

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Alu repeats and human genomic diversity

6 September 2017

1 reference

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Kinetics of human immunodeficiency virus type 1 (HIV) DNA integration in acutely infected cells as determined using a novel assay for detection of integrated HIV DNA.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2862469

Alu insertion polymorphisms for the study of human genomic diversity

6 September 2017

1 reference

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Both memory and CD45RA /CD62L naive CD4( ) T cells are infected in human immunodeficiency virus type 1-infected individuals

6 September 2017

1 reference

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Presence of an inducible HIV-1 latent reservoir during highly active antiretroviral therapy

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2862469

Quantification of latent tissue reservoirs and total body viral load in HIV-1 infection

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2862469

Human immunodeficiency virus type 1 integrase: effects of mutations on viral ability to integrate, direct viral gene expression from unintegrated viral DNA templates, and sustain viral propagation in primary cells

6 September 2017

1 reference

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HIV population dynamics in vivo: implications for genetic variation, pathogenesis, and therapy

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2862469

Integration is required for productive infection of monocyte-derived macrophages by human immunodeficiency virus type 1.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2862469

Multiple effects of mutations in human immunodeficiency virus type 1 integrase on viral replication

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2862469

An antibody that binds the immunoglobulin CDR3-like region of the CD4 molecule inhibits provirus transcription in HIV-infected T cells.

6 September 2017

1 reference

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Biological and biochemical characterization of a cloned Leu-3- cell surviving infection with the acquired immune deficiency syndrome retrovirus

6 September 2017

1 reference

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Integration is not necessary for expression of human immunodeficiency virus type 1 protein products

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2862469

Human immunodeficiency virus type 1 spinoculation enhances infection through virus binding

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2862469

HIV-1 integrates into resting CD4 T cells even at low inoculums as demonstrated with an improved assay for HIV-1 integration.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2862469

Alu-LTR real-time nested PCR assay for quantifying integrated HIV-1 DNA.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2862469

Analysis of early human immunodeficiency virus type 1 DNA synthesis by use of a new sensitive assay for quantifying integrated provirus

14 September 2017

1 reference

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Integration is essential for efficient gene expression of human immunodeficiency virus type 1.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2862469

Repetitive sequences in eukaryotic DNA and their expression

14 September 2017

1 reference

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A quantitative assay for HIV DNA integration in vivo

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2862469

Analysis of human immunodeficiency virus type 1 integrase mutants

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2862469

Development of methods for coordinate measurement of total cell-associated and integrated human immunodeficiency virus type 1 (HIV-1) DNA forms in routine clinical samples: levels are not associated with clinical parameters, but low levels of integr

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2862469

Quantification of integrated and total HIV-1 DNA after long-term highly active antiretroviral therapy in HIV-1-infected patients

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2862469

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2862469

Human immunodeficiency virus infection of cells arrested in the cell cycle

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2862469

Dynamics of total, linear nonintegrated, and integrated HIV-1 DNA in vivo and in vitro

26 June 2018

1 reference

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A robust measure of HIV-1 population turnover within chronically infected individuals.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2862469

Evolution of total and integrated HIV-1 DNA and change in DNA sequences in patients with sustained plasma virus suppression

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2862469

Self-limiting, cell type-dependent replication of an integrase-defective human immunodeficiency virus type 1 in human primary macrophages but not T lymphocytes

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2862469

In vivo fate of HIV-1-infected T cells: quantitative analysis of the transition to stable latency

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2862469

The CD16 Monocyte Subset Is More Permissive to Infection and Preferentially Harbors HIV-1 In Vivo

2 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1016/J.YMETH.2009.01.002

A sensitive, quantitative assay for human immunodeficiency virus type 1 integration

7 January 2021

1 reference

Crossref

https://api.crossref.org/works/10.1016/J.YMETH.2009.01.002

10.1016/J.YMETH.2009.01.002

7 January 2021

Identifiers

DOI

1 reference

20 August 2017

1 reference

20 August 2017

PubMed publication ID

19195495

1 reference