Epigenetics: heterochromatin meets RNAi. (Q37384283)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19188930 AND SRC:MED&resulttype=core&format=json

20 January 2020

review article

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title

Epigenetics: heterochromatin meets RNAi (English)

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19188930 AND SRC:MED&resulttype=core&format=json

20 January 2020

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2

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20 January 2020

author name string

Ingela Djupedal

series ordinal

1

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20 January 2020

publication date

1 March 2009

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20 January 2020

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19188930 AND SRC:MED&resulttype=core&format=json

20 January 2020

volume

19

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19188930 AND SRC:MED&resulttype=core&format=json

20 January 2020

issue

3

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20 January 2020

page(s)

282-295

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Histone modification and the control of heterochromatic gene silencing in Drosophila

20 January 2020

cites work

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21 January 2018

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Molecular landscape of modified histones in Drosophila heterochromatic genes and euchromatin-heterochromatin transition zones

21 January 2018

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Identification of a nonhistone chromosomal protein associated with heterochromatin in Drosophila melanogaster and its gene

21 January 2018

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Expression and functional analysis of three isoforms of human heterochromatin-associated protein HP1 in Drosophila.

21 January 2018

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Central role of Drosophila SU(VAR)3-9 in histone H3-K9 methylation and heterochromatic gene silencing

21 January 2018

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The Arabidopsis thaliana genome contains at least 29 active genes encoding SET domain proteins that can be assigned to four evolutionarily conserved classes

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Control of CpNpG DNA methylation by the KRYPTONITE histone H3 methyltransferase

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Pivotal role of AtSUVH2 in heterochromatic histone methylation and gene silencing in Arabidopsis

21 January 2018

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Functional mammalian homologues of the Drosophila PEV-modifier Su(var)3-9 encode centromere-associated proteins which complex with the heterochromatin component M31

21 January 2018

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Regulation of chromatin structure by site-specific histone H3 methyltransferases

21 January 2018

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The Polycomb protein shares a homologous domain with a heterochromatin-associated protein of Drosophila

21 January 2018

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The chromo shadow domain, a second chromo domain in heterochromatin-binding protein 1, HP1

21 January 2018

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Molecular biology of the chromo domain: an ancient chromatin module comes of age.

21 January 2018

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Chromodomains are protein-RNA interaction modules

21 January 2018

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DNA of Drosophila melanogaster contains 5-methylcytosine

21 January 2018

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RNA-directed de novo methylation of genomic sequences in plants.

21 January 2018

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X inactivation, differentiation, and DNA methylation

21 January 2018

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Chromatin assembly: a basic recipe with various flavours

21 January 2018

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Dosage compensation in mammals: fine-tuning the expression of the X chromosome

21 January 2018

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Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans

21 January 2018

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How do microRNAs regulate gene expression?

21 January 2018

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Introduction of a Chimeric Chalcone Synthase Gene into Petunia Results in Reversible Co-Suppression of Homologous Genes in trans

21 January 2018

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Small RNAs correspond to centromere heterochromatic repeats

21 January 2018

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Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi

21 January 2018

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Analysis of a piwi-related gene implicates small RNAs in genome rearrangement in tetrahymena

21 January 2018

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Methylation of histone h3 at lysine 9 targets programmed DNA elimination in tetrahymena

21 January 2018

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Heterochromatic silencing and HP1 localization in Drosophila are dependent on the RNAi machinery

21 January 2018

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Drosophila argonaute-2 is required early in embryogenesis for the assembly of centric/centromeric heterochromatin, nuclear division, nuclear migration, and germ-cell formation

21 January 2018

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Dicer is essential for formation of the heterochromatin structure in vertebrate cells

21 January 2018

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Dicer-deficient mouse embryonic stem cells are defective in differentiation and centromeric silencing

21 January 2018

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Gene expression: long-term gene silencing by RNAi

21 January 2018

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The growing catalog of small RNAs and their association with distinct Argonaute/Piwi family members

21 January 2018

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The microRNAs of Caenorhabditis elegans

21 January 2018

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PolIVb influences RNA-directed DNA methylation independently of its role in siRNA biogenesis

21 January 2018

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Elucidation of the small RNA component of the transcriptome

21 January 2018

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The small RNA profile during Drosophila melanogaster development

21 January 2018

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miRNAs control gene expression in the single-cell alga Chlamydomonas reinhardtii

21 January 2018

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Comparative analysis of the small RNA transcriptomes of Pinus contorta and Oryza sativa

21 January 2018

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Sorting of Drosophila small silencing RNAs

21 January 2018

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Analysis of the C. elegans Argonaute family reveals that distinct Argonautes act sequentially during RNAi

21 January 2018

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In vitro analyses of the production and activity of secondary small interfering RNAs in C. elegans

21 January 2018

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Distinct populations of primary and secondary effectors during RNAi in C. elegans

21 January 2018

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RETRACTED: Secondary siRNAs result from unprimed RNA synthesis and form a distinct class

21 January 2018

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Methylation protects miRNAs and siRNAs from a 3'-end uridylation activity in Arabidopsis.

21 January 2018

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Methylation as a crucial step in plant microRNA biogenesis

21 January 2018

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Characterization of the piRNA Complex from Rat Testes

21 January 2018

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Specific association of Piwi with rasiRNAs derived from retrotransposon and heterochromatic regions in the Drosophila genome

21 January 2018

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A distinct small RNA pathway silences selfish genetic elements in the germline

21 January 2018

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Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila

21 January 2018

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Role for a bidentate ribonuclease in the initiation step of RNA interference

21 January 2018

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Domains in gene silencing and cell differentiation proteins: the novel PAZ domain and redefinition of the Piwi domain

21 January 2018

1 reference

Structure of Dicer and mechanistic implications for RNAi

21 January 2018

1 reference

Dicing and slicing: the core machinery of the RNA interference pathway

21 January 2018

1 reference

RNA silencing systems and their relevance to plant development

21 January 2018

1 reference

RNA interference effector proteins localize to mobile cytoplasmic puncta in Schizosaccharomyces pombe.

21 January 2018

1 reference

RNAi-mediated targeting of heterochromatin by the RITS complex

21 January 2018

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An RNA-directed nuclease mediates post-transcriptional gene silencing in Drosophila cells

21 January 2018

1 reference

The Argonaute family: tentacles that reach into RNAi, developmental control, stem cell maintenance, and tumorigenesis

21 January 2018

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Asymmetry in the assembly of the RNAi enzyme complex

21 January 2018

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RNAi as random degradative PCR: siRNA primers convert mRNA into dsRNAs that are degraded to generate new siRNAs.

21 January 2018

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Endogenous siRNAs from naturally formed dsRNAs regulate transcripts in mouse oocytes

21 January 2018

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Cellular RNA-dependent RNA polymerase involved in posttranscriptional gene silencing has two distinct activity modes.

21 January 2018

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Nomenclature and functions of RNA-directed RNA polymerases

21 January 2018

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Dual role for argonautes in microRNA processing and posttranscriptional regulation of microRNA expression.

21 January 2018

1 reference

Dicer is required for chromosome segregation and gene silencing in fission yeast cells.

21 January 2018

1 reference

RNA Polymerase II Is Required for RNAi-Dependent Heterochromatin Assembly

21 January 2018

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RNA Pol II subunit Rpb7 promotes centromeric transcription and RNAi-directed chromatin silencing

21 January 2018

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Cell cycle control of centromeric repeat transcription and heterochromatin assembly

21 January 2018

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RNA interference guides histone modification during the S phase of chromosomal replication.

21 January 2018

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A species of small antisense RNA in posttranscriptional gene silencing in plants

21 January 2018

1 reference

Argonaute2, a link between genetic and biochemical analyses of RNAi

21 January 2018

1 reference

Establishment and maintenance of a heterochromatin domain

21 January 2018

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A single Argonaute protein mediates both transcriptional and posttranscriptional silencing in Schizosaccharomyces pombe

21 January 2018

1 reference

Global effects on gene expression in fission yeast by silencing and RNA interference machineries.

21 January 2018

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Involvement of Dcr1 in post-transcriptional regulation of gene expression in Schizosaccharomyces pombe

21 January 2018

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Heterochromatin and RNAi are required to establish CENP-A chromatin at centromeres

21 January 2018

1 reference

Centromeres and kinetochores: from epigenetics to mitotic checkpoint signaling

21 January 2018

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Two RNAi complexes, RITS and RDRC, physically interact and localize to noncoding centromeric RNAs.

21 January 2018

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Chp1-Tas3 interaction is required to recruit RITS to fission yeast centromeres and for maintenance of centromeric heterochromatin.

21 January 2018

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Roles of the Clr4 methyltransferase complex in nucleation, spreading and maintenance of heterochromatin.

21 January 2018

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Tethering RITS to a nascent transcript initiates RNAi- and heterochromatin-dependent gene silencing.

21 January 2018

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A conserved siRNA-degrading RNase negatively regulates RNA interference in C. elegans.

21 January 2018

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A conserved motif in Argonaute-interacting proteins mediates functional interactions through the Argonaute PIWI domain

21 January 2018

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RNA interference (RNAi)-dependent and RNAi-independent association of the Chp1 chromodomain protein with distinct heterochromatic loci in fission yeast.

21 January 2018

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Functional separation of the requirements for establishment and maintenance of centromeric heterochromatin.

21 January 2018

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The centromeric retrotransposons of rice are transcribed and differentially processed by RNA interference

21 January 2018

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ARGONAUTE4 control of locus-specific siRNA accumulation and DNA and histone methylation

21 January 2018

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DICER-LIKE1: blind men and elephants in Arabidopsis development

21 January 2018

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RNAi-mediated pathways in the nucleus

21 January 2018

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Transcriptional silencing and promoter methylation triggered by double-stranded RNA

21 January 2018

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RNA-directed transcriptional gene silencing in plants can be inherited independently of the RNA trigger and requires Met1 for maintenance

21 January 2018

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Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning

21 January 2018

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Highly integrated single-base resolution maps of the epigenome in Arabidopsis

21 January 2018

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HDA6, a putative histone deacetylase needed to enhance DNA methylation induced by double-stranded RNA

21 January 2018

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Plant nuclear RNA polymerase IV mediates siRNA and DNA methylation-dependent heterochromatin formation

21 January 2018

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RNA polymerase IV directs silencing of endogenous DNA.

21 January 2018

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Atypical RNA polymerase subunits required for RNA-directed DNA methylation

21 January 2018

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Silencing by imprinted noncoding RNAs: is transcription the answer?

21 January 2018

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Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

21 January 2018

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Antisense transcription in the mammalian transcriptome

21 January 2018

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Higher-order structure in pericentric heterochromatin involves a distinct pattern of histone modification and an RNA component

21 January 2018

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Dicer is essential for mouse development

21 January 2018

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Argonaute-1 directs siRNA-mediated transcriptional gene silencing in human cells

21 January 2018

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The assembly and maintenance of heterochromatin initiated by transgene repeats are independent of the RNA interference pathway in mammalian cells

21 January 2018

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Small interfering RNA-induced transcriptional gene silencing in human cells

21 January 2018

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The antisense strand of small interfering RNAs directs histone methylation and transcriptional gene silencing in human cells

21 January 2018

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Promoter-associated RNA is required for RNA-directed transcriptional gene silencing in human cells

21 January 2018

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Small dsRNAs induce transcriptional activation in human cells

21 January 2018

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Activating gene expression in mammalian cells with promoter-targeted duplex RNAs

21 January 2018

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Epigenetic silencing of tumour suppressor gene p15 by its antisense RNA

21 January 2018

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Regulation of endothelial nitric oxide synthase by small RNA.

21 January 2018

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Intergenic transcripts regulate the epigenetic state of rRNA genes

21 January 2018

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Transcriptional silencing of nonsense codon-containing immunoglobulin minigenes

21 January 2018

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A mammalian microRNA cluster controls DNA methylation and telomere recombination via Rbl2-dependent regulation of DNA methyltransferases

21 January 2018

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MicroRNAs control de novo DNA methylation through regulation of transcriptional repressors in mouse embryonic stem cells

21 January 2018

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The small RNA regulators of Escherichia coli: roles and mechanisms*

21 January 2018

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Antisense RNA stabilization induces transcriptional gene silencing via histone deacetylation in S. cerevisiae.

21 January 2018

1 reference

Two different Argonaute complexes are required for siRNA generation and heterochromatin assembly in fission yeast

21 January 2018

1 reference

The protein encoded by the Drosophila position-effect variegation suppressor gene Su(var)3-9 combines domains of antagonistic regulators of homeotic gene complexes

21 January 2018

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7 January 2021

Comprehensive analysis of heterochromatin- and RNAi-mediated epigenetic control of the fission yeast genome

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7 January 2021

Chemistry. How are alkynes scrambled?

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7 January 2021

Expression of a truncated tomato polygalacturonase gene inhibits expression of the endogenous gene in transgenic plants

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7 January 2021

Flavonoid genes in petunia: addition of a limited number of gene copies may lead to a suppression of gene expression

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7 January 2021

Sorting of small RNAs into Arabidopsis argonaute complexes is directed by the 5' terminal nucleotide

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7 January 2021

Coupling of double-stranded RNA synthesis and siRNA generation in fission yeast RNAi

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7 January 2021

Intra- and intercellular RNA interference in Arabidopsis thaliana requires components of the microRNA and heterochromatic silencing pathways

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7 January 2021

Small non-coding RNAs in Archaea

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7 January 2021

RNAi-dependent and -independent RNA turnover mechanisms contribute to heterochromatic gene silencing

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7 January 2021