Collective behavior in gene regulation: the cell is an oscillator, the cell cycle a developmental process (Q37137919)

18 August 2017

1 reference

title

Collective behavior in gene regulation: the cell is an oscillator, the cell cycle a developmental process (English)

1 reference

18 August 2017

Robert R Klevecz

1

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18 August 2017

Caroline M Li

series ordinal

2

1 reference

18 August 2017

Ian Marcus

series ordinal

3

1 reference

18 August 2017

Paul H Frankel

series ordinal

4

1 reference

18 August 2017

language of work or name

English

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publication date

10 April 2008

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18 August 2017

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18 August 2017

275

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18 August 2017

10

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18 August 2017

2372-2384

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Evolution of the clock from yeast to man by period-doubling folds in the cellular oscillator

18 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2858570

Regulation of yeast oscillatory dynamics

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2858570

A rapid genome-scale response of the transcriptional oscillator to perturbation reveals a period-doubling path to phenotypic change

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2858570

Single-cell proteomic analysis of S. cerevisiae reveals the architecture of biological noise

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2858570

Fluctuations in nonequilibrium systems

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2858570

A genomewide oscillation in transcription gates DNA replication and cell cycle

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2858570

Metabolic integration during the evolutionary origin of mitochondria

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2858570

Toward a detailed computational model for the mammalian circadian clock

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2858570

Generalized singular value decomposition for comparative analysis of genome-scale expression data sets of two different organisms

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2858570

Stochastic gene expression in a single cell

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2858570

Dynamic architecture of the yeast cell cycle uncovered by wavelet decomposition of expression microarray data

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2858570

Singular value decomposition for genome-wide expression data processing and modeling

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2858570

Fundamental patterns underlying gene expression profiles: simplicity from complexity

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2858570

Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2858570

A genome-wide transcriptional analysis of the mitotic cell cycle

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2858570

Genetic control of the cell division cycle in yeast

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2858570

Quantized generation time in mammalian cells as an expression of the cellular clock

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2858570

Control of oscillating glycolysis of yeast by stochastic, periodic, and steady source of substrate: a model and experimental study

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2858570

Cellular Clocks and Oscillators

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2858570

Oscillatory phenomena in biochemistry

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2858570

Intragenic tandem repeats generate functional variability

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2858570

Gene Expression Dynamics Inspector (GEDI): for integrative analysis of expression profiles

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2858570

Mammalian cell cycles need two random transitions

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2858570

Gene expression waves. Cell cycle independent collective dynamics in cultured cells.

27 June 2018

1 reference

https://api.crossref.org/works/10.1111/J.1742-4658.2008.06399.X

Respiratory oscillations in yeast: clock-driven mitochondrial cycles of energization

21 January 2018

1 reference

https://api.crossref.org/works/10.1111/J.1742-4658.2008.06399.X

Logic of the yeast metabolic cycle: temporal compartmentalization of cellular processes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111/J.1742-4658.2008.06399.X

Evolutionary rate in the protein interaction network

21 January 2018

1 reference

https://api.crossref.org/works/10.1111/J.1742-4658.2008.06399.X

Quantitative phosphoproteome analysis using a dendrimer conjugation chemistry and tandem mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1111/J.1742-4658.2008.06399.X

A hypothesis-based approach for identifying the binding specificity of regulatory proteins from chromatin immunoprecipitation data.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111/J.1742-4658.2008.06399.X

Towards a proteome-scale map of the human protein–protein interaction network

21 January 2018

1 reference

https://api.crossref.org/works/10.1111/J.1742-4658.2008.06399.X

Integration with the human genome of peptide sequences obtained by high-throughput mass spectrometry

21 January 2018

1 reference

https://api.crossref.org/works/10.1111/J.1742-4658.2008.06399.X

Tuning in the transcriptome: basins of attraction in the yeast cell cycle

21 January 2018

1 reference

https://api.crossref.org/works/10.1111/J.1742-4658.2008.06399.X

Geometry of gene expression dynamics.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111/J.1742-4658.2008.06399.X

Comparison of human adult and fetal expression and identification of 535 housekeeping/maintenance genes

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2858570

Stochastic protein expression in individual cells at the single molecule level

3 September 2018

1 reference

https://api.crossref.org/works/10.1111/J.1742-4658.2008.06399.X

Quasi-exponential generation time distributions from a limit cycle oscillator

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18410382

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

A mycoplasma-like archaebacterium possibly related to the nucleus and cytoplasms of eukaryotic cells

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18410382

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1111/J.1742-4658.2008.06399.X

1 reference

18 August 2017

1 reference

18 August 2017

PubMed publication ID

18410382

1 reference