HDAC-mediated suppression of histone turnover promotes epigenetic stability of heterochromatin. (Q36866340)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23604080 AND SRC:MED&resulttype=core&format=json

29 February 2020

title

HDAC-mediated suppression of histone turnover promotes epigenetic stability of heterochromatin (English)

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29 February 2020

2

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29 February 2020

Shiv I. Grewal

series ordinal

3

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29 February 2020

author name string

Ozan Aygün

series ordinal

1

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29 February 2020

publication date

21 April 2013

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Nature Structural & Molecular Biology

29 February 2020

published in

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29 February 2020

volume

20

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29 February 2020

issue

5

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29 February 2020

page(s)

547-554

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Set2 methylation of histone H3 lysine 36 suppresses histone exchange on transcribed genes

29 February 2020

cites work

1 reference

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Defects in RNA quality control factors reveal RNAi-independent nucleation of heterochromatin.

29 September 2017

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Spt6 is required for heterochromatic silencing in the fission yeast Schizosaccharomyces pombe.

29 September 2017

1 reference

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The Cul4-Ddb1Cdt2 Ubiquitin Ligase Inhibits Invasion of a Boundary-Associated Antisilencing Factor into Heterochromatin

29 September 2017

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Chromodomain-mediated oligomerization of HP1 suggests a nucleosome-bridging mechanism for heterochromatin assembly.

29 September 2017

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Asf1/HIRA Facilitate Global Histone Deacetylation and Associate with HP1 to Promote Nucleosome Occupancy at Heterochromatic Loci

29 September 2017

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Combinatorial, site-specific requirement for heterochromatic silencing factors in the elimination of nucleosome-free regions

29 September 2017

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Genome-wide kinetics of nucleosome turnover determined by metabolic labeling of histones

29 September 2017

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Stc1: a critical link between RNAi and chromatin modification required for heterochromatin integrity.

29 September 2017

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Diverse roles of HP1 proteins in heterochromatin assembly and functions in fission yeast.

29 September 2017

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High-Affinity Binding of Chp1 Chromodomain to K9 Methylated Histone H3 Is Required to Establish Centromeric Heterochromatin

29 September 2017

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Heterochromatin and RNAi are required to establish CENP-A chromatin at centromeres

29 September 2017

1 reference

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Nucleosome destabilization in the epigenetic regulation of gene expression

29 September 2017

1 reference

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The JmjC domain protein Epe1 prevents unregulated assembly and disassembly of heterochromatin

29 September 2017

1 reference

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Genome-wide replication-independent histone H3 exchange occurs predominantly at promoters and implicates H3 K56 acetylation and Asf1.

29 September 2017

1 reference

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Chromatin challenges during DNA replication and repair

29 September 2017

1 reference

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Heterochromatin revisited

29 September 2017

1 reference

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Histone demethylation by a family of JmjC domain-containing proteins

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3661211

Dynamic regulation of replication independent deposition of histone H3 in fission yeast

29 September 2017

1 reference

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RNA Pol II subunit Rpb7 promotes centromeric transcription and RNAi-directed chromatin silencing

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3661211

Genomewide analysis of nucleosome density histone acetylation and HDAC function in fission yeast

29 September 2017

1 reference

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Evidence for eviction and rapid deposition of histones upon transcriptional elongation by RNA polymerase II.

29 September 2017

1 reference

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RITS acts in cis to promote RNA interference-mediated transcriptional and post-transcriptional silencing

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3661211

A chromodomain protein, Chp1, is required for the establishment of heterochromatin in fission yeast.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3661211

Tandem bromodomains in the chromatin remodeler RSC recognize acetylated histone H3 Lys14

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3661211

RNAi-mediated targeting of heterochromatin by the RITS complex

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3661211

A novel jmjC domain protein modulates heterochromatization in fission yeast

29 September 2017

1 reference

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Controlling the double helix

29 September 2017

1 reference

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Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi

29 September 2017

1 reference

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Epigenetic codes for heterochromatin formation and silencing: rounding up the usual suspects

29 September 2017

1 reference

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Transitions in distinct histone H3 methylation patterns at the heterochromatin domain boundaries

29 September 2017

1 reference

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Translating the Histone Code

29 September 2017

1 reference

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Role of histone H3 lysine 9 methylation in epigenetic control of heterochromatin assembly

29 September 2017

1 reference

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Selective recognition of methylated lysine 9 on histone H3 by the HP1 chromo domain

29 September 2017

1 reference

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Methylation of histone H3 lysine 9 creates a binding site for HP1 proteins

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3661211

Distinct protein interaction domains and protein spreading in a complex centromere.

29 September 2017

1 reference

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Histone deacetylase homologs regulate epigenetic inheritance of transcriptional silencing and chromosome segregation in fission yeast

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3661211

Histone acetylation in chromatin structure and transcription

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3661211

A Recombinationally Repressed Region Between mat2 and mat3 Loci Shares Homology to Centromeric Repeats and Regulates Directionality of Mating-Type Switching in Fission Yeast

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3661211

Three additional linkage groups that repress transcription and meiotic recombination in the mating-type region of Schizosaccharomyces pombe

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3661211

HP1 proteins form distinct complexes and mediate heterochromatic gene silencing by nonoverlapping mechanisms

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3661211

Interaction of Epe1 with the heterochromatin assembly pathway in Schizosaccharomyces pombe

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3661211

Reorganization of chromatin is an early response to nitrogen starvation in Schizosaccharomyces pombe

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3661211

Roles of the Clr4 methyltransferase complex in nucleation, spreading and maintenance of heterochromatin.

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3661211

Host genome surveillance for retrotransposons by transposon-derived proteins

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3661211

The nucleation and maintenance of heterochromatin by a histone deacetylase in fission yeast.

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3661211

Genome-scale profiling of histone H3.3 replacement patterns.

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3661211

RNAi-independent heterochromatin nucleation by the stress-activated ATF/CREB family proteins

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3661211

Establishment and maintenance of a heterochromatin domain

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3661211

RNA Polymerase II Is Required for RNAi-Dependent Heterochromatin Assembly

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3661211

Dynamics of Replication-Independent Histone Turnover in Budding Yeast

4 September 2018

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RNA elimination machinery targeting meiotic mRNAs promotes facultative heterochromatin formation

21 January 2018

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Comprehensive analysis of heterochromatin- and RNAi-mediated epigenetic control of the fission yeast genome

31 March 2020

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A role for TFIIIC transcription factor complex in genome organization

31 March 2020

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SHREC, an effector complex for heterochromatic transcriptional silencing

31 March 2020

1 reference

Swi6/HP1 recruits a JmjC domain protein to facilitate transcription of heterochromatic repeats

31 March 2020

1 reference

Continuous histone H2B and transcription-dependent histone H3 exchange in yeast cells outside of replication

31 March 2020

1 reference

A new inducible protein expression system in fission yeast based on the glucose-repressed inv1 promoter

31 March 2020

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Schizosaccharomyces pombe genome-wide nucleosome mapping reveals positioning mechanisms distinct from those of Saccharomyces cerevisiae

31 March 2020

1 reference

Distinct roles of HDAC complexes in promoter silencing, antisense suppression and DNA damage protection

31 March 2020

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31 March 2020

Identifiers

DOI

10.1038/NSMB.2565

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23604080 AND SRC:MED&resulttype=core&format=json

29 February 2020

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29 February 2020

PubMed publication ID

23604080

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23604080 AND SRC:MED&resulttype=core&format=json